Microarray Probes on PGSC0003DMT400075153
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52218_PI426222305 |
JHI_St_60k_v1 |
GGTTGTTCAATTCATCATCTCTCAAGTTTTCATGTGTTCGCAACAACAATTTATCTGTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075153
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075153 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19180.1 |
+3 |
6e-33 |
124 |
96/242 (40%) |
jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |
Transcript Sequence (1044 bp)
>PGSC0003DMT400075153 1044 pgsc_dm_v3.4
CTATAATCCTTCAACTTTACTTTTCATTTCATTCAAAAAAGAAAGAAGAAAAAATAGTAC
TATTACAAATGGCTTCATCGGAGATTGTGGATTCCGGGAGACATGCCGGTCAGAAATCGC
ATTTCTCTCATACATGTAATTTGTTGAGCCAATACTTGAAGGAGAAGAAAGGTTCTTTAG
GAGATCTCAGCCTTGATATACATCGCAATTTTGATTCAACTGGTATGATATGATGATTTT
GCAAAGTTTTTTTTTTGTTTTGGAGTTTGTATAACATTAACATATGCGGTTGTGTTTCAA
CAGGTTCTACTACTATGGATTTGTTGCCAATGATTGAGAAATCTGGTGAGTCGGTTCAGA
AATCGATGAATCTGTTCCGTCAAGGTGCAATGAAGGCTGAATCGGAACCGGAAAAGGCAC
AGATGACGATATTCTATGCAGGTCAAGTTATTGTGTTTAATGATTTTCCGGCAGATAAAG
CTAAGGAAATCATGCTTATGGCTAGTACTAGCAAGGGAAACAACACACATAAACAATTGG
AATCTGGTGCCGATTTGGTTGTTCCCAGTTTCGGAAAAACTTCGATCCAGGAAAATCAAA
TGCCTAACCAGCCAATTGTTTCTGATTTACCAATTGCGAGAAGAGCATCACTAACAAGGT
TTTTGGAGAAGAGAAAAGATAGGCTGACTGCAAAAGTACCTTACTATAGAGAGGAAGCAG
CTCCTAAGAAGGAAGAAAACAAGGCGGCATGGCTGGGATTGGGTGGTCAATTTGCAGTGA
AAACTGAGCAATACTAGTGGCTTTAATTGCTTAGTAGAAGCCTAGATAATCAATTACTAC
AAGTTTAATCTTGGCTTCAACCCTCATTGAACTCCATACTTAGATCTGACTATTATTATT
ATTATTATGATTTCTGTAATTAAAACCAGATATGGTTGTTCAATTCATCATCTCTCAAGT
TTTCATGTGTTCGCAACAACAATTTATCTGTCTATACTGTTTTCTTTTATGTTGCTTTGC
TTTGATTGGAGATGAGAATATTAG
