Microarray Probes on PGSC0003DMT400073781
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23324_PI426222305 |
JHI_St_60k_v1 |
CAGAACATCATCAATTGAGAATGAACCTAGAACTCTTAATCTCAACCAAATTCAGTTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073781
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073781 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G33467.1 |
+1 |
5e-14 |
67 |
43/98 (44%) |
unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:16101691-16102084 REVERSE LENGTH=102 |
Transcript Sequence (760 bp)
>PGSC0003DMT400073781 760 pgsc_dm_v3.4
TTTCGAAAAAAATAAAGTTTGGAATATTATTTTTTGTGGACAAACAATATTATTCAACCA
TATTATATATTCTGTTTGGAACAAATCAAATAGAGAGAAAATTACAAAATGGGAGGTTCA
TCAATGGTTCCATTAAACAGAACATCATCAATTGAGAATGAACCTAGAACTCTTAATCTC
AACCAAATTCAGTTTGCTAGAGATGCAGCACTTTACGTAATTAATACAAGAGGTTTAGAA
GAAGCTATGAGAATTTTCACTGAGGGATTAGAACCAGTTTCTCAATGTGTACATGACAAA
GAAGAAGATGTTATGATGGAATATGCTGATGAATTAGAGAGTTTATCAAATCCTTTAAGG
ATTAATCCAGAAACTAGAGACATTGCTACTGCTCCGTTTTAGTTTAAACAACTCGATATA
TAAAGCATTCTGGATGAAAAAATCGTACATGAAGATGGGAGCATTAGTTTCAAAAGTTTG
AAACTATAATCTATAGGGTGTTTTTTATCGTTGTTTTAAAACTTCTGTTATGCTACGTTC
GATTGTATAAATTAAAATTTTGTTTTAGATTTTGTGATATGTATCACAAGAAAGTTGTGT
AGGAAGGGCTTTTTGTTCTTAGAGGCTTTGGGAGTTCTTTCATTCTTTTTAACTCTTTTT
TTTACAAAGTACATATTTAATGCTTTATATAGATTATGTTGGAGGTCGTTTGGTTGAAAT
TAGTTATGTTGGGATTATAATTATAAAATTTTAATTTGAG
