Microarray Probes on PGSC0003DMT400073684
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15458_PI426222305 |
JHI_St_60k_v1 |
ACGATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTTCCCTTGATTATGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073684
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073684 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15620.1 |
+3 |
0.0 |
836 |
408/539 (76%) |
DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556 |
Transcript Sequence (2230 bp)
>PGSC0003DMT400073684 2230 pgsc_dm_v3.4
GTAACTTCCCATGAAAAATGAACAAACTGCTCTCCCTTTCGCTAATGCTAATCACCCGGC
TCACGTTAGTGAACGCACCTTATTATACAAGTACCAGAAGTTAAAACCCATTTATGGCGG
GAAACCCCATAACCGTTTAAATAAAATCTCTTTGTCTTCATTTTTGTCATTTCTCTGTAA
AATCATCCATGGCTTCTGGGGCGAACTCTTTGATGTGGTTCAGGAAGGGTTTGAGACTCC
ATGATAATCCAGCTTTAGAGTATGCAGCTAAAGGGTCGAAGTTTCTGTACCCGGTTTTCG
TGATTGATCCACACTATATGGAGCCTGATCCGACTGCGTTTTCTCTGGGTTCCTCAAAAG
CCGGGTTGAACCGGATACAATTTTTGCTTGAAAGCCTTGTTGATCTCGATTTGAGTCTTA
AGAAGGTTGGTTCACGTTTGTTGGTGCTCAAGGGTGACCCTGGTGAGGTTTTGATTCGCT
GCTTGAAGGAGTGGAGCATAGGGAAACTTTGCTTTGAGTATGACACAGAGCCCTACTATC
AAGCTTTAGATGAGAAAGTCAAGGGCTATGTTTCTGGAACTGGCGTAGAGATTTTCTCTC
CTGTGAGCCATACCCTCTACAATCCTGCCGATATAATACGTAAGAATGGTGGATCCCCAC
CTCTGAGTTATCAGTCTTTCCTCAAACTGGCTGGGCAACCATCTTGGGCAACAACTCCTC
TTTTAACAACCATATCTTCACTTCCTCCTATTGGAAATACTGGAAGTTTTGCAGTCTCAG
AAGTTCCAACTGTCAGAGAACTTGGTTATGAAGATTTAGCAGAGGACGAAAGGACTCCTT
TTAAAGGTGGAGAATCAGAAGCACTGAAGAGATTGAGAGAATCAATTGCTAACAAGGAAT
GGGTTGCAAATTTTGAGAAACCCAAGGGTGATCCATCTGCATTTCTAAAACCAGCAACAA
CTGTTTTATCACCCTACTTAAAGTTTGGATGTCTCTCTTCCAGGTACTTCTACCAGTGCA
TTCAGGACATTCTGAAATGCTCTAAAAAGCATACTTCTCCACCTGTTTCTCTTCTTGGAC
AGTTGTTATGGCGCGACTTTTTCTACACAGCTGCCTTCGGGACTCCTAACTTTAATCAGA
TGAAGGGTAACAGAATATGCAAACAGATACCTTGGAAGAATGATGATGAATTGCTAGCTG
CTTGGAGAGATTCCAGGACAGGGTTTCCTTGGATTGACGCCATAATGGTCCAGCTTCGAA
AGTGGGGTTGGATCCACCATCTTGCTCGACACAGTGTTGCATGCTTTTTAACTCGTGGGG
ATCTGTTTGTGCATTGGGAGAGAGGACGTCATGTTTTTGAAAGACTGCTTATTGACTCTG
ATTGGGCAATCAACAATGGAAACTGGTTGTGGCTATCATGCTCTTCATTTTTTTACCAGT
ATAATCGGATTTATTCACCAATCTCATTTGGAAAAAAGTATGATTCTGCCGGGAACTATA
TCAGGCATTTTCTTCCTGTTTTAAAAGATATGCCTAAGGAGTACATATATGAGCCTTGGA
CTGCTCCCATAAGTGTCCAACGTAAAGCAAAATGCATCATCGGCATAGATTATCCCAAAC
CAGTTGTTTCCCATGATTCTGCAAGCAAAGAATGTAAGATGAGACTTGGTGAAGCATATG
CATTGAACAAAAAGCTGAATGGATTGGTCAGTGACGAAGACTTGAACGAGTTAAGAAGAA
AAGCAGACAATGAATCTACCACTCTGGATTCTGTTTCCAGGAAGAAAAAACAAAAGTTAA
TTGACTAAGACTACGCCGTTGAAACCGTAGGTGTCTACAAGATCGGCAGCAAGGCAACCA
GTATTTATAGGAGCTACGAAAGAACATTCTCCTCCAACGACATCTCCTTTAAAATGATGC
CTTAGGTACCTTAACTCAATAGTGTTAAAATGTAGGAATCCTATCCTAGTATCATGTGTG
TGCCAGGATTCAGGAGATTAGAGTTAACATACTGAGAGAAGGAAAATGAGTGTTTGTGTG
TGACAAAATAGAGAAGCACACATCTGGTGTGTTTTGATATTTAAGTGAATGAGATCATTG
AGATATTCTAGTCTTCTTTAATAGTGACAACCTGGAAAGAAGAATGTGATGTGTCCCTGT
TGTTCTTTGACGATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTTCCCTTG
ATTATGTTTT
