Microarray Probes on PGSC0003DMT400073683
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15422_PI426222305 |
JHI_St_60k_v1 |
ACGATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTTCCCTTGATTATGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073683
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073683 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15620.1 |
+3 |
0.0 |
780 |
390/539 (72%) |
DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556 |
Transcript Sequence (2158 bp)
>PGSC0003DMT400073683 2158 pgsc_dm_v3.4
GTAACTTCCCATGAAAAATGAACAAACTGCTCTCCCTTTCGCTAATGCTAATCACCCGGC
TCACGTTAGTGAACGCACCTTATTATACAAGTACCAGAAGTTAAAACCCATTTATGGCGG
GAAACCCCATAACCGTTTAAATAAAATCTCTTTGTCTTCATTTTTGTCATTTCTCTGTAA
AATCATCCATGGCTTCTGGGGCGAACTCTTTGATGTGGTTCAGGAAGGGTTTGAGACTCC
ATGATAATCCAGCTTTAGAGTATGCAGCTAAAGGGTCGAAGTTTCTGTACCCGGTTTTCG
TGATTGATCCACACTATATGGAGCCTGATCCGACTGCGTTTTCTCTGGGTTCCTCAAAAG
CCGGGTTGAACCGGATACAATTTTTGCTTGAAAGCCTTGTTGATCTCGATTTGAGTCTTA
AGAAGGTTGGTTCACGTTTGTTGGTGCTCAAGGGTGACCCTGGTGAGGTTTTGATTCGCT
GCTTGAAGGAGGGCTATGTTTCTGGAACTGGCGTAGAGATTTTCTCTCCTGTGAGCCATA
CCCTCTACAATCCTGCCGATATAATACGTAAGAATGGTGGATCCCCACCTCTGAGTTATC
AGTCTTTCCTCAAACTGGCTGGGCAACCATCTTGGGCAACAACTCCTCTTTTAACAACCA
TATCTTCACTTCCTCCTATTGGAAATACTGGAAGTTTTGCAGTCTCAGAAGTTCCAACTG
TCAGAGAACTTGGTTATGAAGATTTAGCAGAGGACGAAAGGACTCCTTTTAAAGGTGGAG
AATCAGAAGCACTGAAGAGATTGAGAGAATCAATTGCTAACAAGGAATGGGTTGCAAATT
TTGAGAAACCCAAGGGTGATCCATCTGCATTTCTAAAACCAGCAACAACTGTTTTATCAC
CCTACTTAAAGTTTGGATGTCTCTCTTCCAGGTACTTCTACCAGTGCATTCAGGACATTC
TGAAATGCTCTAAAAAGCATACTTCTCCACCTGTTTCTCTTCTTGGACAGTTGTTATGGC
GCGACTTTTTCTACACAGCTGCCTTCGGGACTCCTAACTTTAATCAGATGAAGGGTAACA
GAATATGCAAACAGATACCTTGGAAGAATGATGATGAATTGCTAGCTGCTTGGAGAGATT
CCAGGACAGGGTTTCCTTGGATTGACGCCATAATGGTCCAGCTTCGAAAGTGGGGTTGGA
TCCACCATCTTGCTCGACACAGTGTTGCATGCTTTTTAACTCGTGGGGATCTGTTTGTGC
ATTGGGAGAGAGGACGTCATGTTTTTGAAAGACTGCTTATTGACTCTGATTGGGCAATCA
ACAATGGAAACTGGTTGTGGCTATCATGCTCTTCATTTTTTTACCAGTATAATCGGATTT
ATTCACCAATCTCATTTGGAAAAAAGTATGATTCTGCCGGGAACTATATCAGGCATTTTC
TTCCTGTTTTAAAAGATATGCCTAAGGAGTACATATATGAGCCTTGGACTGCTCCCATAA
GTGTCCAACGTAAAGCAAAATGCATCATCGGCATAGATTATCCCAAACCAGTTGTTTCCC
ATGATTCTGCAAGCAAAGAATGTAAGATGAGACTTGGTGAAGCATATGCATTGAACAAAA
AGCTGAATGGATTGGTCAGTGACGAAGACTTGAACGAGTTAAGAAGAAAAGCAGACAATG
AATCTACCACTCTGGATTCTGTTTCCAGGAAGAAAAAACAAAAGTTAATTGACTAAGACT
ACGCCGTTGAAACCGTAGGTGTCTACAAGATCGGCAGCAAGGCAACCAGTATTTATAGGA
GCTACGAAAGAACATTCTCCTCCAACGACATCTCCTTTAAAATGATGCCTTAGGTACCTT
AACTCAATAGTGTTAAAATGTAGGAATCCTATCCTAGTATCATGTGTGTGCCAGGATTCA
GGAGATTAGAGTTAACATACTGAGAGAAGGAAAATGAGTGTTTGTGTGTGACAAAATAGA
GAAGCACACATCTGGTGTGTTTTGATATTTAAGTGAATGAGATCATTGAGATATTCTAGT
CTTCTTTAATAGTGACAACCTGGAAAGAAGAATGTGATGTGTCCCTGTTGTTCTTTGACG
ATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTTCCCTTGATTATGTTTT
