Microarray Probes on PGSC0003DMT400073563
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40782_PI426222305 |
JHI_St_60k_v1 |
AACACAAAGCAATCTTGCATTCTGTTTTAGGTAACGGTCAGTGAATAGCCATAACTAAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073563
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073563 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G13920.1 |
+2 |
3e-105 |
353 |
296/875 (34%) |
receptor like protein 50 | chr4:8043861-8046536 FORWARD LENGTH=891 |
Transcript Sequence (3148 bp)
>PGSC0003DMT400073563 3148 pgsc_dm_v3.4
TAGTATTTAAAATAGGCAAAAAAAATTGATCTGTTAGCCAAAAAAATAAATACAAACGAA
TCCTGTTGTTTATTTGCGAGGATTTTGCTATTTTATACGTTTCAGATCTGCAGAAATTTG
GAGTTTCTTTTTTCTGTTGACAGTCCAAATGAGAAGTGAAATGTTTTCCCATCTTTTCTT
GATCCTATTACTCTCCATCTGCTGTAAAATGAGTGATGTAGTGGCAGCTAATTCCAGTAA
ATGTCTTGAGGATCAGAAGAAGTTACTGCTGCAGCTGAGAAATAAGCTTACTTATGATTC
TGAAATATCTACCAAGCTAGTGAAGTGGAACCAGCGGATTGACTGCTGTCAATGGGAGGG
TGTCACTTGCAACGGTGAAGGCCAAGTTATTGGTCTTGACCTTAGTGCTGAATCATTCTC
GGGCAGTATCACTCCGTTAGCTGATCTTAAGTTTCTCTCTATTGTCCATCTTGATGGGAA
CAATTTATCTGCACCAATTCCAGAGTTCTTTGCGGAATTCACCAATTTAACTGTCTTGAG
TCTGAGTTCCTGCAACTTGATAGGAGAGGCACCTCAGAAAATATTCCAGGTACCAACTCT
GCAAACAATTGACTTATCAGTAAATAGGATGCTTGGGGGTTCTTTACCTGAATTTCCTTC
AAAAGGATCTCTACAAAACCTGGATCTTAGTTATACGAAATTTTCAGGAAGTTTACCTGA
GTCCATAGGGAACCTTAGGAAGTTGTCGCGTGTTGAACTTAGAGCTTGTAATTTTACAGG
TCCAATTCCATCTTCTATGGAAAATCTAACCCAGCTTGTTCTTCTGGATTTCAATTTGAA
TAGCTTCACGGGTTCATTTCCATCTTTTAAGCTGTCCAAAAATCTCACTGATATATACTC
TGCTAGAAATCGTTTGATAGGAATATCATCAGACTGGGAAGGCTTTGAGAATCTTGAGTA
TCTTGACTTGAGTAGCAATTCAATTTCTGGGATCATTCCAGAATCATTGTTTTACCTACC
CTCACTTTCAGCTTTAGTTCTGTCCAACAACAAGTTTTCTGGCCAAATAACTGAATTACA
AAATGTGATTTCTCCACTTAAAAGTCTTGAGTTGAGTTCCAACAAATTGGAAGGGCCAAT
ACCTGAGTTTTTATTTGAGCTGCATGATCTTTATGGTCTGTCACTTTCATTCAACAAGTT
TAACGGTACTGTGCAGTTGAAGAAGTACACAAAGATCAATAAACTTGTAGATCTTGATCT
GTCCCACAACAGTTTATCAGTTGACACCAATATAAGTGAATCGGACCTTGCCTTGCTACC
CCAGCTAAATAGTTTCATGTTAGCGTCATGCAATCTGCAGAATATTTCCTTCCTCAAGAA
CCAATCAAAGTTGTCGATGTTAGATCTCTCAAACAACCAGCTTACTGGTGAAATACCAAA
CTGGTTGGTGGAAATCAATGATGGACTTCTCCGTTTTCTGAATCTTTCTTTCAATCAATT
TACGCGTCTTCAAGAACCATATACAATTGGCTTTCTCATGAATTTCCTTGATCTGCATTC
AAATCTGCTCACTGGGGTTATTCCATTACCACCACGTGCAGCTGCTTATATTGACTTCTC
AGACAATAACTTTTCATCTTTTCCACCTGACTTTGGCAATTATCTAGTAACTGCTCGGTT
CCTCTCAATTGCAAACAACAAAGTTATCGGTAGTATCCCTTCTTCGATATGCAACTCCAG
CTATCTTGAAGTACTTGAGTTATCAAACAACAGTTTGAATGGCATAATACCACCATGTTT
AGCAGAAAAGAGCAGCACACTGAAAGTACTGAACCTGGGAAAGAACAATCTCATAGGAGA
TATACCTGAAAAGTTTTCTTATAATTGTGAGTTGCAGAGCCTTGACCTCAGTCAGAATCA
CTTAACAGGTCTGCTTCCTCGTTCTTTGTCCAACTGCACAAAGTTAAAGGTAATAAATAT
TGGAAACAACAAGATCAAGGATACTTTTCCCTGCTGGTTGAGGAACATGTCAGATCTTCG
TGTACTTGTATTACGCTTCAATGGTTTCCATGGGAACATTGATTGCTCACGTGTGAATTC
CAACTGGACTGCACTTCAAATCATGGACCTAGCTTCCAACAATTTAGGGGGTGTTCTTCC
CCGAGGTTCATTCTTGGAGCTAAAAGCAATGATGGCTGACCCATCTTTAACACATTCACG
CTCTGATATCTTGCATTTTGAGTCTTCTATTAGGCCAATATATTATCAGGACAGAGTCAC
TCTTTCTCTTAAAGGACAAGATGTTACACAGACAAAGATCTTTATCTTCTTCACCTCCAT
TGACTTTTCAAGTAACAATTTTGTGGGGAACATACCAGAGATAGTTGGAGATCTCAGATC
ACTTAATCTTCTCAATATTTCACACAACAATCTCACGGGTCAAATACCTCCAGCAATTGG
AAATTTGAAGCAATTGGAATCACTGGACCTCTCATTCAACAAGTTAGGTGGCAATATCCC
AGAAAAGCTTGCTAGCCTCACATTTCTTTCCTTCTTAAATTTATCATCTAATGAATTGGT
CGGAATGATTCCACGAGGCAACCAAATTCAAACATTTGGAGAAAGTTCTTTTGAAGGAAA
CAAGGGGCTATGTGGGTTTCCGCTGAACAGAACTTGCAAGAATAATTCAGCAGATGCACC
TTCTGAACCAGAAGTTGAAGAGGAAGAATTCATTTCAATGACGGAGATTTATGTAAGTGC
TATGTTGGGATTTATTGTTGGTATTGGGATCATCTTCCTACCACTTCTGTTCTCAAAAAG
ATGGAACCAGTCGTACAACAGAATAATTAACAGATTAATTTTAAGGATATTTCAGCAGCA
AAATCAAGAAAAGAAAACTAGTAGCAGTAGTGTAGCATCTTGGAAAAAGGCAGCAGGGAA
ATCAAGAGGCAGACATTAATTTCACAGGATGTAACACTTCCTTGCAGCATGCTGCTCACT
ATTAGTACTTCTAATTGTTTCCACTATGAGTTATCTGTGTTTGTTTACCTTTCATGATTC
ATTTTAGTTGCTTCTTATTACATAGAAGAACACAAAGCAATCTTGCATTCTGTTTTAGGT
AACGGTCAGTGAATAGCCATAACTAAAC
