Microarray Probes on PGSC0003DMT400072322
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2444_PI426222305 |
JHI_St_60k_v1 |
GTTGGATTCCAGGAATTTATTTTAGAATAATATTATCTATGGAGCAGCCTATGTCCTCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072322
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072322 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G06510.1 |
+2 |
2e-28 |
112 |
68/166 (41%) |
nuclear factor Y, subunit A10 | chr5:1985439-1986591 FORWARD LENGTH=269 |
Transcript Sequence (1076 bp)
>PGSC0003DMT400072322 1076 pgsc_dm_v3.4
GTTAAGTGTGAAAAATTGTCCTTATTTAATTTGATGTCCAATTATTGTTTGTTGTTGGAT
TCCAGGAATTTATTTTAGAATAATATTATCTATGGAGCAGCCTATGTCCTCTGACTCTCA
TGAATCAGGTGTTTCTATGCAATCATATAATATGGACTATCAAGGCCACTTTGATCTAGG
TTTATTTGGTCAATCCCTGGGCCGGATTATGCTACCATTGAATTTGACCTCCCATGATGA
AAGCCCAATATTTGTCAATGCCAAGCAATATCATGGGATACTTAGGCGTAGAAAATTCCG
CGCAAAGGAAATGGAGAAGAACTTACTTAAACCGCGTAAGCCATTCTTGCACCTCTCGCG
CCATCTCCATGCCAAGAGTAGACCTAGGGGAGGTGGGGGCCGCTTCTTGAACACGAGGAA
GACGAATGGAAGTATCAATGATGATGCAAACGGTACAACCAAGACTAGCAACAAGAAATG
TCATCACACTATATCACAAAATTCTGAAGTTTTGCAGTCTGATGTATTCAATTTTAACTC
AACAAAGGAAACAACTAACAATATGTCCTCTATTGAGGCGTTTCTTGATACAACGAATAC
TGGCCATGACATTCTCATGGCCAGTAAGTGGGGTTCTGCAGCAGCAGTTGATAGCTACTG
CTGCAGAAACCTCAAAATTTGATAACGTTTTACCCTTACTACAACCAAATTGAGGTGTAT
GGACTCTGTTCCTACCGCGATTTGGTTTCTAGAATAGGCAGATCATCCTTGGCTATACTC
ATTAAGGTTGCTTCTATATATCATTCCATGTAGCTATTCAGATTGCTACATGGATGTTAC
GAAGTGCTAAAGCCTTAATGCACTTTTTCTTTATAGTAGGACGTATATCTTAAATCGAAA
TAAGTTTATGAAGGTTCAAATTATCGAGTATGTGATGTTGTGTATATGTTGATTTGTAAA
AATTGAATTGAAGTATTGATTTAGTATTTGGTGTGTTTGAGACTGGACTTGTACTATGGT
ATCAGAGTAAGACTCATTTCAATCTATTGTTTCTGATGTTAGGTCGTGTCTTATAT
