Microarray Probes on PGSC0003DMT400072202
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2014_PI426222305 |
JHI_St_60k_v1 |
CTACTGTTGTGATTAGAATGACAAATGGTTTGATGGCTAAAGTAGTTAAAAGGGTTGCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072202
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072202 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc10g080870.2 |
+1 |
0.0 |
979 |
472/511 (92%) |
genomic_reference:SL2.50ch10 gene_region:61381618-61384584 transcript_region:SL2.50ch10:61381618..61384584+ go_terms:GO:0019825 functional_description:Cytochrome P450 |
| TAIR PP10 |
AT4G39490.1 |
+1 |
2e-160 |
470 |
245/522 (47%) |
cytochrome P450, family 96, subfamily A, polypeptide 10 | chr4:18365229-18366788 FORWARD LENGTH=519 |
Transcript Sequence (1533 bp)
>PGSC0003DMT400072202 1533 pgsc_dm_v3.4
ATGGATGTTCTTGGTTACTATGTTATTCCCTTGATAATCCTATGTTTAACTTATTGGTAC
TTGAAAAATAAATGGACCAAAACTTCAAAGCCAATAGATTGGCCCATTATTGGAATGTTG
CCTGGATTTGTTCATAATGCTCATAGAATCCATTCATTTTTCACTGATCTTCTCTTAGAA
ACTAGTAGCAATTTCGAGTTCCGTGGCCCTATTTTCGCCAACATGGACATGTTATTCACT
AGTGATCCTGCAAATATCCATCATATCCTGAGTCGAAATTTCTCAAACTATCCAAAGGGA
CCTGAGTTTCGTGAAATATTCGATATATTAGGAAATGGAATCTTCAATGTTGATTCTGAA
TTATGGGAGATTCATAGGAAAACAACCATGTACTTAATGAACCATGCCAAGTTCCAAACA
TTGTTACAACGTAACGTATGGGACACGATCGATAAAGGTATTGTTCCAACTCTTGATATT
TTTGCAAAACAGGACACCCCTGTTGATTTGCAAGACATTTTTCAGAGATTTAGTTTCGAT
ACTATTAGTAAATTATTACTTGATCACGATCCCAAAAGTTTGTCTGTAAATCTACCTTAT
GTACCATGTGAAAAGGCGTTCAACGACATGGTTGATGCACTTTTATATCGACATGTCTTG
CCTGAAAGCTGTTGGAAGTTGCAAAAATGGCTTCGAATTGGTAAAGAGAAGAATCTAATG
AACGCGTGGGAGGCTCTTGATCAATTCATATATCCTGCTATATCGAAAAGGCAAGAGAAG
TTGATGAGTAATAAAATTAAAGACGATGATTTTGATCTATTCAGTGACTATGTCAAAGCA
TACAATCAATGGACAAATGAAGATGATAAGAATTTGGGAAGTGTAGAAAAATTTCTAAGA
GATACTTTCTTGAATTTGATGTTTGCTGGTAGAGACACTACAAGTACAACTCTCACTTGG
TGTTTTTGGCACTTGGCTAAAAATCCCTTAGTTGTGAAAAAGATTCGAGAAGAGATTCAA
CAACAATTGCATCTAAAAGAAGACGAAAGTCTCAAGTTTTTCAACATAGAAGAGTCGCGA
AAATTGGTCTATCTACATGGTGCATTGTGTGAAGCTCTTCGACTATTCCCACCCGTTTCA
ATTGAGCATAAATCTCCACTTAAACTTGACGTCCTACCAAGTGGTCATCGTGTGAGTCCA
AACATGAAAATATTGATATCGTTTTATACAATGGGGAGAATGGAGAGTTTATGGGGAAAA
GATTGTTTAGAGTTTAGGCCAGAGAGATGGATTACTGAACGTGGAGGACTTAAACATGAG
CCATCTTACAAATTTCCAGCGTTTCTCGCGGGGCCAAGGACTTGTGTTGGGAAGGAAATG
GCATTCATTCAGATGAAAATGGTGGCAGCTACCATGATATACAATTACAATATTCAATTA
TTGGAAGCACAAACAATTTCACCAACAGCTACTGTTGTGATTAGAATGACAAATGGTTTG
ATGGCTAAAGTAGTTAAAAGGGTTGCTATTTAG
