Microarray Probes on PGSC0003DMT400071761
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49185_PI426222305 |
JHI_St_60k_v1 |
CTGTGGAGAAAGTAAAAGGTTCCTCAGGCCTTAAATTCTTTAACATTATTGTCCAAAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071761
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071761 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G39830.1 |
+3 |
0.0 |
715 |
335/497 (67%) |
Cupredoxin superfamily protein | chr4:18479103-18481184 FORWARD LENGTH=582 |
Transcript Sequence (1908 bp)
>PGSC0003DMT400071761 1908 pgsc_dm_v3.4
AAAGAACATAGCAAAATAACAAAGTAATAATTTTGTTATTCAAGTTCAATCCAACATGGT
TGAGCATAATTTTCATCAACAAAGTCATAGTTTTGTTAAGTTGGTGATATTTCTATGCTT
GTTATTTCTATCTGCTAATATTTCAGTTGAAGCGCGAATTCGTCATTATGAATGGGAGGT
TAAATATGAATACAAATCACCAGATTGTTTCAAGAAACTTTCTATTAGTATCAATGGTAA
AACTCCAGGACCTACTATTGTTGCTCAACAAGGTGACACTATTGTTGTTGAAGTACAAAA
ATAGTTTGTTAACTGAAAATCTTGCTATTCATTGGCATGGAATTAGACAGATTGGAACAC
CATGGGCTGATGGAACAGAAGGTGTGACACAATGTCCTATTGTGCCAGGGGATACTTTTG
TATACAAATTTGTTGTTGATAGGGCTGGAACATATTTGTACCATGCTCATTATGGTATGC
AAAGACAAGCAGGACTTCAAGGAATGATCAGAGTATCATTACCTGATGGAGTTTTAGAGC
CATTTTCATATGATCATGATAAGAGTATTCTTCTCACTGATTGGTACCACAAGAGCACTT
ATGAACAAGCAACTGGTCTTGCTTCTTTGCCTTTTTCTTGGGTTGGAGAACCACAGTCAA
TCTTGATTCATGGAAGAGGAAGATTCAATTGTTCTATTCCAAGCATAGATCCTACTCTTT
GTAATGCTACAAATCCTCAATGTACACCTTATTCAATGACTGTTGTTTCTGGCAAGACTT
ATAGGCTTAGAATTGGCAGCTTGACTGCTCTTTCTGCTCTAAGTTTTGAAATTGAGGGGC
ATAACATGACGGTTGTTGAGGCAGATGGTCACTATGTGGAGCCATTTGTGGTAAAAAATC
TTTTCATTTATTCTGGAGAAACATACTCAGTCCTAATTAAAGCTGATCAGGACCCTACAA
GAAATTATTGGGCTAGTACAAAAGTTGTCAGCAGGAATAATACTACTCCAAATGGTTTGG
GTATTTTCAATTATTACCCAAACCATCCTAGGAGATATCCTCCTACTGTACCACCCCCGG
GGCCACGTTGGGATGACGTTACCCCCAGGATGGCACAGAGTGTTGCGATCAAGTCCCACA
AAGATTTCATCCATGCCCCTCCTCTGACATCGGACAGGGTCATTGTCATGCTCAACACAC
AAAACAGGGTGAACGGGTATGTACGTTGGTCAGTCAACAATGTCTCGTTCAACATGCCTC
ATACGCCTTACCTGATCGCCCTTAAGCACAACTTATTACATACTTTTGAGCAAACCTCTC
CTCCAGACAACTATGACCACAAGAATTATGACATCTTCAATATCGCGCCCAATGTGAATG
CTACAACTAGCAACTCAATTTATCGATTGAAGTTTAACACAACAGTGGACATCATATTGC
AAAATGCCAACACAATGAATCTAAACAACAGTGAGACACATCCTTGGCATTTACATGGAC
ATGACTTTTGGGTCATGGGCTATGGTAATGGAAAGTTCAACCAATCTATTGACCCAAAGA
ATTACAACTTTGTGAACCCAATAATGAAAAACACAATCCCAGTCCATCCTTATGGATGGA
CCGCATTGCGATTTCGGGCCGATAATCCAGGAGTTTGGGCCTTCCATTGCCATATTGAGT
CACATTTCTTCATGGGAATGGGAGTTGTATTTGAAGAAGGAATTGAGAAAGTTGGCAAAT
TGCCTACTTCTATCATGGGCTGTGGAGAAAGTAAAAGGTTCCTCAGGCCTTAAATTCTTT
AACATTATTGTCCAAAAGATTACTTTAGTTTGATATTGTTTGGATTCTTTTGATAGTTGC
CAAAAATAAAAAAAAATGTGTTCCTTTTTGTTTTAAAACATCTACACT
