Microarray Probes on PGSC0003DMT400071728
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50729_PI426222305 |
JHI_St_60k_v1 |
CATTGATTCTGTTCATGGTATTTGCAAAGATTGAGTACATTGAGGAATTTGAATCTCCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071728
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071728 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28550.3 |
+3 |
1e-77 |
159 |
88/107 (82%) |
related to AP2.7 | chr2:12226168-12228251 REVERSE LENGTH=464 |
Transcript Sequence (2219 bp)
>PGSC0003DMT400071728 2219 pgsc_dm_v3.4
CCCCCCCCCCCCCCACATCAAACCCATATCGTCATTTTCAGCTCCTATAAATGCCGATGT
CTGCAGCGACCCCTTAATGTGAAACCCTTTTTTTCTTGATTCTTCTTTGTATTTGAGCTG
ATTGTTGTTGTTTTCTGCTTTTTTACTGAAATTGAAACGAGGGTATACGGTAATTTCGAG
ATGTTTGACCTTAATCTTTGTTTCGAGGAAGATGCTATGGAAACTGTTACGGCGTCGGGG
AAGCTGAAGGAACTGTCATTTGGGCAAATTGAGAATTCCGGTACATCGAATTCATCAATT
GTGAACGTGGAAACGTCCAGTACTGCCGGCGATGATGAGTTCATTTCGTGTTCCGATCAG
CGCACTGATGGGTACGCATTTGAAATTCTCAGAGCTGATTATGAAGGGAATGGGTTTGTG
ACTAAGGAGTTGTTTCCGTTAACCGGTGGAGAATCGGCAGCGCCGCCGTCGCAGCAGCAG
CAGTGGTTGGATCTCTCGGGTAATTACAGTGATGTTCCGATGGAGCAGAGGATCGTTCTT
GGTCCACCACAGCTGAGACAACAGGTGAAGAAGAGTCGAAGAGGACCTAGGTCCCGGAGT
TCCCAATACCGCGGTGTCACATTCTATCGGAGAACTGGACGATGGGAATCTCACATCTGG
TCAGTTTACTTCTTGCAAAAAAAATTCCCGATAACTGTTGTGTTCGGGCTGGGCTAGTTT
GCGTTCACCTCGACTAATGAGCAAGAAACTAACTTATTTGTTTGATGTATTATGTCAGGG
ATTGTGGGAAACAAGTTTATTTAGGGGGATTTGACACTGCACATGCTGCTGCTAGGGCAT
ATGATCGTGCTGCGATTAAATTTAGAGGACTTGATGCAGATATCAATTTCAATGTCAGTG
ATTATCATGATGATTTAAAGCAGATGGGGAACTTTTCAAAGGAAGAGTTTGTGCACGTAC
TTCGACGACAGAGCACTGGTTTCTCTAGAGGAAGTTCGAAATACAGGGGAGTTACATTGC
ACAAATGTGGACGATGGGAAGCTCGGATGGGGCAGTTTCTTGGAAAGAAGTGAGTAACAA
CTTATCTGTATTATCGGTGATATAGCTGTTTAAACGCTTTCTATGTCATTACACTGATTG
TATGAAGTAGAGGGAATATTGTCTCATTGGATATATGCCTGCAGGTATATCTATCTTGGA
CTGTTTGACAGCGAGATAGAAGCTGCAAGGTCCAATGATCAAAACTTGACTCACCTCTCC
CTTTTATGTTATAACGTTTACGCTTTCAACATTGACTGGACTTGGTCTTTTGCTGTTGTT
CAGGGCGTATGATAAGGCTGCTATAAAATGCAACGGAAGGGAGGCAGTCACCAATTTTGA
GCTAAGCACATATGAAGGTGAATTAAGTACCGAGGCTGATAATGGAGGTGCAGACCATAA
TCTTGATCTGAACTTGGGAATAGCCCCCTCTGTATTCGCTGATGACCAGGGTGGCAACAC
CTGCCAAATGGGAAACTATGTAGTCCAGTGTGTCTCAAATGGTTTGCCTGGATATGGAGG
AGCCATGAACATTCCTACTACCACAATGGGAGGTAAACTGCTTCACGGCCATCAACTGCT
GACTGATCGCCCTCTGCTCTGGAACGGAGTGAACACCAGTATCTTTCCCACATTGAAGGG
AACAGCATTAGGGAAGGGTATAGAAGTTGATTCTTCTCCAAATTGGACGCGGCAAGACCA
ACATCCTTATGGCGGGAGTCCTTCAGTGCCACTCTTCTCTACTGCAGCATCATCAGGATT
CGCTAATACAACTACAGCTGCTGCTCAGCTACCCTGCTTTTCCAATGGAAAATTACCTTA
CCAGCATTCACCATCACTTGCCAATATGAACTTTGCGCATTATTACTGCAGGAGCTGAAG
CGTAGTTAGCTATTAGATCAAAAGTACCTACGCGATATCTTTTCTGGATATTGAATTCTA
GTTTCCTTCCTTAGGAATGAGCCAGTATGAAACTTGATAAATTTGCTGTACAAAAAGTTT
CAGAACAGCATTTTTAACATTGCTTCGACAACTCTGACTTATTGAGAATATTCATTTGGA
GCTTCTTGCTCAATCATGTTCTTTCATATTCTGCTAGTATATCTTTTAATAGAGGCATTG
ATTCTGTTCATGGTATTTGCAAAGATTGAGTACATTGAGGAATTTGAATCTCCACTATT
