Microarray Probes on PGSC0003DMT400071689
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8792_PI426222305 |
JHI_St_60k_v1 |
TGGCCTTAGGCCCCCAATTTTAGAGGAGCCCATTTTTTAGTTAATTGGGTAAGATTAAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071689
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071689 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G60360.3 |
+1 |
6e-35 |
130 |
70/119 (59%) |
aleurain-like protease | chr5:24280044-24282157 FORWARD LENGTH=361 |
Transcript Sequence (830 bp)
>PGSC0003DMT400071689 830 pgsc_dm_v3.4
ATAAATTCTCCACTATTCCTACCAACCTTATTCATCCAATCCTCTTCCCGAATTACAATT
ACAATGTCACGTTCCTCAGTCCTATTGGTTCTCATCGCCGGCCTTTTCGCCGCTACAATT
ACCGGAGCGGCGACCTTTGCTGATGAGAATCCGATCAGACAAGTCGTTGTTTCGGAAGAA
GTGGAGAACGGAATTCTTCAAGTGGTTGGCGAGAGTGACGACGCTCTCTCCTTTGCTCGC
TTTGTTAACAAGTATGGGAAAAAGTACGAGTCCGTTGAGGAGATCAAGCTAAGGTTTGAG
ATATTTGTGGAGAATCTGAAGATGATTCGATCGCACAACAACAAAAGATCAGGACTATCA
TACAAACTCGGTGTCAATAAGTTTACCGACCTAACATGGGATGAGTTCCGTAGCGTCAAG
TTGCAGGGTACACCTCAAAACTGTTCTGCCACCACAAAGAGCAATCTTAAGTTCACTAAC
GTCATTCTACCAGAGAGGGTATGTCCAATCAGCAGAATGAATTGTTGCACTTGAGCTCAG
GGTCTTTAGGAAAATTAATAGTCACTCAGCCAGTGGCGTAGCCACCCTTATATTGGACAC
CCTTCGTCGGAAAATTATACCGTATATATAAGTAAAATGATAAACAAAGTGGTTAAATAA
CATATTTTGAACACTCTTGACATAGGGGCGGCTGGTTAGGCTTAAGGAAAAGTCCTTGGC
CTTAGGCCCCCAATTTTAGAGGAGCCCATTTTTTAGTTAATTGGGTAAGATTAAATTAAA
AAAAATTAGAATGAAGACAATAATAAATGCAAACGGATGGAAAAAAAATG
