Microarray Probes on PGSC0003DMT400071639
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48199_PI426222305 |
JHI_St_60k_v1 |
AAGCTGGAATTCATCAATTTCATAGGACTCAAGTACATGGTGGGCATTAGTGCTGCATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071639
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071639 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54980.1 |
+2 |
3e-54 |
179 |
85/157 (54%) |
Uncharacterised protein family (UPF0497) | chr5:22315799-22316560 FORWARD LENGTH=194 |
Transcript Sequence (1054 bp)
>PGSC0003DMT400071639 1054 pgsc_dm_v3.4
CTTTGCCATGATTTCTCTTCTTGAAAGGTCACCCCACTTCTTCTCTTTCTTCCCACTATA
GATACCCCTTCAAACTCATCATTTCAAATCCTTCTTTTCAACTAAAAATATTAAAAATTC
CAAATATTTTTTTTTAATAGCATAAACAGATTCACCAACTCTTTCTCCCTATATAAAAAA
TTAAATCTATATGTATAGTGTTGTAAAGAGGAGTTGTTCTATATTTTGACATAACAAAAT
GGGATTTGATGCATCACATCTTAAAGCCCTTGACTGTACACTAAGGTTGTTTGTCATTCC
TTTGTCTATTGCCTCCATATGGCTTTCTGTCACCAATCAACAGAACAATATCAGTTATGG
CAAGCTGGAATTCATCAATTTCATAGGACTCAAGTACATGGTGGGCATTAGTGCTGCATC
AGGTGGATATGCTCTGTTTACTGCTATTGCTTTGTGGGTCAAGGGTTTAGTCACTAAAGC
ATGGTTTTTCTTTGTTTCTGACCAGCTTGTAGCATACTTAATGGTTACATCATTGGCTGC
AATATGGGAAATTCTTTACTTAGCCTACAATGGTGACCAAATGGTGTCATGGAGTGAAGC
TTGCACTTCTTTTGGAAAATTCTGCAGTAGATTGAAGCTGGTTTTGGTTCTTCATGCCAT
CACCCTTTGTTGTTTTCTTGCTTTAGCTGTGATTTCAGCTTACAGAGTCTTCAGCAGATT
TCAGCCTCCTAGTAAAGACAATGAAGAAGAAAAGGAAATGCACTAATTGATTTTAGTTAC
CAAAATTCACATACATGGATTGTCACTTCACTTGTGTTAATATAGAGTTTTTTTGAATAA
AATTGTTTGTCTATAGTACAACTATAACCTACTCAGTAAAATCTCGTAAGTGGAGTCTGA
AAAAGGTAGAATGTACGTACACCTTACTTCTACCTTGTGACGGTGGAGAGATTGTTTCTG
AAGCATCCTCAGCACAAGAAAAAATGACAGTGAAGAAAACATAGCACTAATTTACGGAAA
CAATAACAATATCAAAGATAGTGCGATAAAGACG
