Microarray Probes on PGSC0003DMT400071045
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17865_PI426222305 |
JHI_St_60k_v1 |
GTTGTCAAGATGCTCATTGTGGGCTTATAATGATAGATGATTGAATTCCTATAGATAGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071045
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071045 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30040.1 |
+1 |
2e-121 |
360 |
172/309 (56%) |
gibberellin 2-oxidase | chr1:10537769-10539570 FORWARD LENGTH=341 |
Transcript Sequence (1266 bp)
>PGSC0003DMT400071045 1266 pgsc_dm_v3.4
GCAAAGCATGGCCTTGCATACAACTACACAAAAACTCATACATTTCTATACAACCAAATA
CTTGTCAACATAACACTCACCATGGTGATCTTGTCCAAACAAACCTCATTCTTCAATGGT
GTTCCATTGATAGACCTCTCTAAACCCGACTCCAAAAACCTCATCGTTAATGCCTGCGAA
GAATTTGGATTCTTCAAAATCATAAACCATGATGTTCCTATGGAATTCATAAGTAAACTC
GAATCCGAAGCCATCAAATTCTTCTCTTCTCCCCTCTCTGAGAAACTAAAAGCAGGGCCT
GCTGATCCTTTTGGCTATGGCAATAAACAAATCGGAACAAATGGCGATTTTGGTTGGGTC
GAACACATCCTCGTATCGACAAACTCCGAATTCAATTACCAGAAATTTGCATCTATATTA
GGTGTCAATCCAGAAAACATTCGGGCTGCGGTTAATGATTATGTTTCAGCAGTGAAGAAA
ATGTCGTGTGATATTCTTGAAATGCTGGCGGAGGGATTAAATATTCATCCAAAGAATGTT
TTCAGTAAGCTTTTGATGGACGAAAATAGCGACTCTGTTTTCAGGGTGAATCACTATCCG
CCATGTTCAGAGATTGAAGGATTGAATGATAATAATAATAATAATGATTTGATTGGATTT
GGAGAACATACTGACCCACAAATCATATCGATATTAAGATCCAATAACACTTCGGGGCTC
CAAATATTACTGAAAGATGGACATTGGATCTCTGTCCCACCTGATGAACATTCTTTCTTC
GTCAATGTTGGTGACTCATTGCAGGTTATGACTAATGGAAGGTTCAAGAGTGTGAAACAT
AGGGTATTGGCTAATAGTGTGAAGTCAAGACTATCAATGATATATTTTGGAGGACCACCA
TTGAGTGAAAAAATAGCACCATTGGCATCACTAATGGAAGGAGAAGATAGTAGTTTGTAC
AAAGAATTTACATGGTTTGAGTATAAAAAATCAGCATATAAAACTAGACTGGCTGATAAT
AGATTGATACTTTTTGAAAAAATTGCAGCCTCATAAGAATAATAATTTTATTTTTATTAT
CTAAAAGTGACAAAGTCCCACCATGTTAGGAATTATGGGTTGTCAAGATGCTCATTGTGG
GCTTATAATGATAGATGATTGAATTCCTATAGATAGCAAAATTTGTATTTTCTTTTTTGT
CTTTCTTATACTGTTTTGTAACTACCAGTCTTGTTAATGATACAATTAATTGGTCCATAG
TTTTTG
