Microarray Probes on PGSC0003DMT400070925
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33783_PI426222305 |
JHI_St_60k_v1 |
CAGTGAGTAAAACACATGCTGCTCTATTTCTTTTGTTCATGGGATTTCATCTTACATAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400070925
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400070925 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G51100.1 |
+2 |
3e-68 |
225 |
117/206 (57%) |
Fe superoxide dismutase 2 | chr5:20773357-20775635 REVERSE LENGTH=305 |
Transcript Sequence (1648 bp)
>PGSC0003DMT400070925 1648 pgsc_dm_v3.4
AATTACATCAACAAAAGGGCAATGCAATGCTAGTCTAGAAAACTCCACACTCTGCTTATT
TCTCCAACTTTCTGTAACCTTTTTACACAAATCACAACTCATGGCCGCCACTGCCTCTGC
TAATTCACTCACATCTGCTTTCCTTCCTCCTCAAGGACTTAATGGATCATCTAAGAGCTT
ACAATGGAGAACCCAAAAGTTGCAGAAACAGTTTGGAAGAAAATCCGACTCTGCTACAAT
AACAGCTAAATTTGACCTCAACTCTCCTCCTTATCCAATGGATGCTTTGGAGCCTCATAT
GAGTAGTAGAACATTTGAATTCCACTGGGGGAAGCATCACAGGGCGTATGTCGACAACTT
AAACAAGCAAATAGAAGGAACAGAATTAGATGGAAAGACACTAGAAGATATAATACTTGT
TACATATAACAAAGGTGCTCCCCTTCCAGCATTCAACAATGCTGCTCAGGCCTGGAATCA
TCAGTTCTTCTGGGAATCTATGAAGCCCAACGGAGGAGGAGAGCCATCTGGTGAATTATT
AGAACTAATCAACAGAGACTTTGGTTCTTATGATACGTTTGTTAAAGAATTTAAGGCAGC
TGCAGCAACACAATTTGGCTCTGGTTGGGCCTGGCTTGCATACAAACCTGAAGACAAAAA
GCTTGCTCTGGTGAAAACTCCTAATGCTGAAAATCCTCTTGTTTTGGGTTACACAGTGAG
TAAAACACATGCTGCTCTATTTCTTTTGTTCATGGGATTTCATCTTACATAACATAGCAG
TTTATACTGTAATAGAAATCTCACAACTGTGGTTTTCATTGCAGCCGCTGCTCACCATAG
ATGTTTGGGAGCATGCCTACTATCTGGACTTTCAGAATCGCCGACCTGACTACATATCTG
TCTTTATGGAGAAACTCATATCATGGGAAGCAGTCAGTTCTAGGCTCAAAGCAGCAACAG
CTTGAGCTGCTTAGCAGGAAAACAGAAAGGATGAAGAGGCAAATCTAGGAGGCACTGAAG
ATGTATGCTGGGAGTTACATACTTGAGGCAGAATGATTTTTGTCAACACTATGATCAATC
CTGTTATATTTCCTTTTCAGTGAGAGTTCTAGATGTCTTAGCTGAGAATTTGAGATGTTT
TATTTTATGCACTTTGCAAGAGTGACAGGTGATTTTCTAAATTCAGATGACAATATTGTT
TATGTTCTCAAGTAGTTGATGGCTGGGGAAATAATACAGAAAATCAAGTTTGAGTTGTAG
AACAACAATGTACAAGGAATTGAATAAAGATATTTATTGCACTTTGATGCTCTAATATCA
GATTGATTCAATGACTGGTAAAGTAAAATAGGGCCCTTACTTACTTCAGAATCTGCTATA
TGGAACAAAGGGCATCCTACCAATTGAAGACTTGATCCAATATTCCCTTTTTCCAAGTTA
GAAATTGTTTCACATCACATTTAGAGGTCGCAAAAGTAGTCCATGAAAACATGATCTACC
CAACTCGTTCAAGTTTGGGTGGTTAGTGACTAGCTAAAGGCTTCTAAAAGAGCGCTCACT
GATAAAGGAGGCTTCTAAATGAGACGACAAGAAGGTTAGCTTAAAGCAGCTATTTTTGAA
CAGTTAGTACTTGAATAATAGTTCACTG
