Microarray Probes on PGSC0003DMT400070461
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4641_PI426222305 |
JHI_St_60k_v1 |
GTAAAGTATTATAAAGAAAATGCTGGTGCTGATGAATCTGTGTTGTTGTATTGGAGTGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400070461
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400070461 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G55290.1 |
+2 |
4e-38 |
137 |
69/171 (40%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:20626208-20627397 REVERSE LENGTH=361 |
Transcript Sequence (671 bp)
>PGSC0003DMT400070461 671 pgsc_dm_v3.4
CCCATCGTTGCTAGATGAAAGAATGATTCAATCTTTCATCATTTCATAGCCAATCCCCAA
CCACCCACACACACTCCTCTCAAAGCCACCATAAAAAAGCCCCACAAATTTCCTTCTTCC
ATTAGTACACACTTATCAATATTCAACACAAATGCCTTCTTCAAAATTTGAACCAAATGA
TGACATATTTGATTTTGTAATCAAGAAAGCAAATGGACTAAAAGGCATAGCAGACACAAG
CCTTGAAATTATTCCAAATCAATGCATTCAACCAAAAGAACAAAGACTAGACAAATCTCA
AATTGACAATCAAGAATCAATCCCCACAATTGATTTGTCAAATTTTGATGATTTAAATGT
TGAAAAATCAATTCAAGAAGCAGCAAACAAGTGGGGTTTCTTCCAAATCATCAATCATGG
CATCCCAATTGAAGTTCTTGAAGATTTGAAAGAAGCAGGACACAAATTCTTTGAATTGCC
AGCTGAAGAAAAAGTAAAGTATTATAAAGAAAATGCTGGTGCTGATGAATCTGTGTTGTT
GTATTGGAGTGCTATTGGTGTCAAAGATGAGAAAGTTTTGGAGTGGAGAGATAGTATAAA
GCATGGTTGTAATCTAGAAAATGATAGCAATCTTTGGCCTCCTCAAACAAGGTAACTTTT
TTGGATTTTTT
