Microarray Probes on PGSC0003DMT400070251
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38955_PI426222305 |
JHI_St_60k_v1 |
TCTTTCGCATTTGAGTCTAGGAGTTTCTCATGACTTCCATGAATTGAATCATTTTGCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400070251
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400070251 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G57810.2 |
+2 |
2e-35 |
138 |
60/93 (65%) |
Cysteine proteinases superfamily protein | chr3:21416336-21417809 FORWARD LENGTH=317 |
Transcript Sequence (2703 bp)
>PGSC0003DMT400070251 2703 pgsc_dm_v3.4
CACAAAACTTTCTCTCACTAAAAATCCCTCATTTTTATCATTTGTTTCTCTCACTAAAAA
AGTTGGTTTAGTTTTCGCCGTCACCACTGAACAGATGCATTTTCATCTTCATCTTCATCA
TCCATAATATATACCAGCAAGCTCTATCTTCTGAGAAATGCCCAATTTAGCTCATACTAA
TTTCTTGTTCAATACGAAAATCTGAAAAAAAAAAGTTCCGGTGATGCTCGGAGTATTGTG
TGCACGTCCTAAGCCTTGGCTATTCGCATCACTCTGCTTATCACACGCCCACGGCTCAAC
GCCTTCGGGTTATAGCAGACTTATTGCGACGAATACTGCTAACAAATCATCGTTATTGTT
AATATCTGGAGGTGGAAGTGGAGGAGGAGGTGGAACGGGAGTAGATCAGAGGCGGAATCA
TTCGATTCATTGCCGTATTGCATCATCTGTAAATCGAGGTGGTGGTGCAGCGTCGATATG
GCATGCGATTCTTCCTGCTGGGAGGAGGAATAAGAAGGATATAAATCGGAGGAATAATAC
GGTGTTTAAACATCATTATGAGCTTGCTAAGAAAGGGGAAGGGTCGTGGAATGTGAATTG
GGATTCTAGGCCGGCGAGATGGTTACATAATCCTGATTCTGCTTGGTTGTTGTTTGGGGT
TTGTTCGTGTTTAGCAGCGCCATCTCTTGATCTATTACCAGATGCTAATTTTGATGTAGC
TGTACCGATTGATAAACAGTCTGTTGTAAATTCTTCAGATGAGGATGATCAAAACTCTGC
CAACTATAGAGTCACTGGGGTTCCAGCGGATGGAAGATGTCTATTTAGAGCGATAGCACA
TATGGCTTGTTTGAGAAATGGGGAGGAAGCTCCGGATGAAAATCGACAGAGAGAACTTGC
TGATGAATTAAGAGCTCAGGTGGTTGATGAGCTGTTAAAGAGGCGAAAAGAAGCTGAATG
GTTTATTGAAGGGGATTTTGATGCATACGTAGAAAGAATTGAAAAGCCATATGTGTGGGG
AGGAGAACCAGAGCTACTAATGGCTTCTCATGTTCTCAAGTGAGTGATGTTTCTGTTTCA
TGATTGATCGTCTTGTCACTTTGCACTTATGAATCCAACTATACATGTTTTTTGAGGCGT
TGATGTTTTGAAATTCACGATGAAACACAGTAATGCTAATGAGAAAAAGATGAAGAAAAG
AAATAAACTTTTGTTTGAGAAGAGAAAGAGTTAAAGAGCATTTTAGTGTGATTCTAAGCT
AGGTTAGTAATACAAGATAGCATGAAGTGACATAGTTTATGCATTTGACAAGATCGTTTC
TGTTGTATGATGAGGAAAGAATTGGTCCTTCATATGTGTTTAGGAAGTATTAGTTATATA
TCCATCGACATTCACTTTCACTTTATCACTTTCAAGTCAAATCAAGTAGGAGAACTGCTT
TTCTAAGAACTACTAGGATATCATATGGAACTACTTTGTCAATGTACTATGTGATCTCTG
GATGACGCTGGTTAAGGCTTCGATTCTAGAATCTGTTGTCCGATTTTGTTGATATATTTC
CTAATTTTTGGTTGCAGGTCCTCAATTTCTGTCTATATGGTAGATAGAAGCTCTGGAAGT
TTAATAAACATATCAAATTATGGAGAAGAATATAGGAAGGAGGGAGAGAGTCCGATTAAC
GTATTGTTTCATGGTTATGGTCACTATGACATTTTGGAGACAATTCCAGAGAAGATTCAC
CAAAAGTTAGAAGAATAAAAGTAGGGTATGATGCCCTTAGAGACGTAGTCTTGATTTTAA
ATTTTCATAAAAGGTAGTTCGCAACGACGATCAAATTGATAAGAAGTTCAGCTATCCAGT
TAACAAAACATCTTCTTTCAGGTCCAGTCAATTTGTTGAGATGATCTTTTCTCTAAAATA
GTGAGCTTGTTTCAATTTTGTAGATTCTCTTGTTGCCTTGTCCAGGAAATTAGTCGAAGC
TAATAGCATGATTCCTCCGTATTTGTTTATTACCAGATAATTCTGGATGTAGTTTTGTTC
AGATGTTTCCTGGTTTGTTTTTTGGTGTCTGAATAGATCCAGTCTGAATATTGATTTATT
AATAATGTGCAGCAACGGAAATGTGACACTGAACTCTCTAAATGTTGTTACTGAATCTGT
GGTTGTCAAGTTATCACTGGAATGGATTATGGATATGTTTGTGCAGTCTGGATCTGCTTA
CATTAGATTTGGGACTTTGTTCTGGAGGGAGCTGTTGGCTAGTTAAGCTTCTCTCTCGAA
CACACTTCTCCCGGATAGTTCCATTGTCTTTAGTCTATAGCCTTTGTGAGCTTCCTTTAT
CCAGTAGCAGAGTTAGGTGGACGCGAGGAGTTCAACTGAATCCCCTTCATCAGAAGATAA
TACTGTCTAGGAAAAAATATGAATTTTCTTGCTTATATATAAATTGTTGAATCCCTTTGA
CATAAGGGAGGATTCTTGTGTACTGATAGTGGTTGTTCTAGTTTACAATTTTAAATCTTA
CTCGTGACGTTTTACATTTTTCGAGTCTTGTTAGAATTCCTGGCTTCGTCACTGCCTATT
CGTGACTGCTCGAAATTTCAGTTAAGCTTGTGTTTCTTGATTAGTATGAGTTCCATCTTT
ATCTCTTTCGCATTTGAGTCTAGGAGTTTCTCATGACTTCCATGAATTGAATCATTTTGC
TAG
