Microarray Probes on PGSC0003DMT400069033
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50804_PI426222305 |
JHI_St_60k_v1 |
CTCTTAGTCGATACTGTGTAATGATCGACTTCATCATATAAGGCCCCAACTATAAATAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069033
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069033 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G12500.1 |
+3 |
8e-169 |
478 |
216/298 (72%) |
basic chitinase | chr3:3962501-3963984 REVERSE LENGTH=335 |
Transcript Sequence (1070 bp)
>PGSC0003DMT400069033 1070 pgsc_dm_v3.4
GTTACTACTACATCAAAATGAGGCTTTCTGAATTCACTACTCTTTTCTTACTATTTTCTG
TGCTTTTGCTGTCTGCCTCGGCAGAGCAGTGTGGTTCACAGGCTGGAGGCGCACTTTGTG
CCTCGGGACTCTGTTGCAGCAAATTCGGCTGGTGTGGTAACACTAATGATTATTGTGGTC
CTGGTAATTGTCAGAGTCAGTGTCCTGGCGGTTCTCCAGGGGACCTTGGCGGTGTCATCT
CAAATTCCATGTTTGATCAGATGCTTAATCATCGCAATGATAATGCTTGTCAAGGAAAGG
GTAATTTCTATAGTTACAATGCCTTCATCAGTGCTGCTGGGTCTTTTCCTGGATTTGGTA
CTACTGGTGATATCACTGCCCGTAAAAGGGAAATTGCTGCTTTCTTTGCCCAAACTTCCC
ATGAAACTACTGGAGGATGGGCTTCAGCACCTGATGGACCATACGCATGGGGTTACTGCT
TCCTTAGAGAGCAAGGTAGCCCGGGCGATTACTGTACACCGAGTAATCAATGGCCTTGTG
CTCCTGGAAGGAAATATTTCGGACGAGGCCCAATTCAAATTTCACACAACTACAACTATG
GGCCATGTGGAAGAGCCATCGGAGTGGACCTTTTAAACAATCCTGATTTAGTAGCCACAG
ACTCAATCATATCATTCAAATCAGCTATCTGGTTCTGGATGACACCTCAATCACCAAAGC
CTTCTTGCCACGATGTCATCACTGGAAGATGGCAACCATCTGGCACTGACCAAGCAGCTA
ATCGTGTCCCTGGATTCGGTGTCATCACAAACATCATCAATGGTGGCCTGGAATGTGGTC
ATGGAAGTGACAGCAGGGTCCAGGACCGAATTGGATTTTACAGGAGGTATTGTGGAATTC
TTGGAGTTAGTCCTGGTGACAATCTTGATTGTGGCAACCAGAGGTCTTTTGGAAACGGAC
TCTTAGTCGATACTGTGTAATGATCGACTTCATCATATAAGGCCCCAACTATAAATAAAT
TTATGTATGTACGAAATTGTATGAATTGTGATTGTAATATGATGGGACCA
