Microarray Probes on PGSC0003DMT400068686
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47408_PI426222305 |
JHI_St_60k_v1 |
GAATATGAATACAAGCATGATTTTGTTGGAGTTGTTAAGGCTTTGTTTGGGTCGAATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068686
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068686 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G16850.1 |
+1 |
3e-23 |
97 |
65/186 (35%) |
plasma membrane intrinsic protein 2;8 | chr2:7301647-7303180 FORWARD LENGTH=278 |
Transcript Sequence (789 bp)
>PGSC0003DMT400068686 789 pgsc_dm_v3.4
ATGGGAGAACTTCTAGGCACAGCGGTTCTTGTTTTCATGTTGGATACAATAGTAATCTCC
ACTTTAGAAAGTGACACGAAAATGCCAAATTTGATTTTGTCAATTCTCGCAGCAGTTATA
ATCACAATCCTACTCTTGGCGGTTGTTCCGGTGTCTGGAGGCCACATCAATCCGGTTATC
TCCTTCTCAGCTGCGCTTGTTGGAATTATATCCATGTCAAGAGCCATAATTTACATAATG
GCACAATGTGTTGGTGCAATTTTAGGTGCACTAGCTCTCAAAGCAGTGGTTAGTTCAACA
ATTGAAGGAACTTTCTCATTGGGTGGTTGTACTGTAACAGTAATTGCACCGGGCCCAAAT
GGGCCTGTTACTGTGGGCCTAGAGACGGCCCAAGCCTTATGGCTAGAGATATTTTGTACA
TTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATGATCATCGACAAGCTAAGGCTCTT
GGACACGTCACTGTCTTGTCCATTGTTGGTGTAGTGTTAGGCCTTCTAGTGTTTATCTCG
ACCACGGTCACCGCCAAAAAAGGCTACGCCGGGGCAGGGATAAACCCGGCGAGGTGTTTC
GGGCCCGCTATTGTTAGAGGAGGTCACCTTTGGGATGGACATTGGATCTTTTGGGTTGGG
CCAACTATTGGTTGTGTAGCCTTTTATGTGTACACAAAGATCATTCCAACAAAGCATTTC
AATGCAGAATATGAATACAAGCATGATTTTGTTGGAGTTGTTAAGGCTTTGTTTGGGTCG
AATGTATAA
