Microarray Probes on PGSC0003DMT400068682
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47394_PI426222305 |
JHI_St_60k_v1 |
GCGCATTAGATTAGTGTATCTCGCGCATCAGATTAGTGTATCATGTATAAAATGTAATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068682
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068682 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G16850.1 |
+2 |
2e-17 |
82 |
62/186 (33%) |
plasma membrane intrinsic protein 2;8 | chr2:7301647-7303180 FORWARD LENGTH=278 |
Transcript Sequence (1400 bp)
>PGSC0003DMT400068682 1400 pgsc_dm_v3.4
AAATACTAGGATCAATTATCTTGGTTTTCTCCCACATATGGCTTCCAAGAATAATGTTGT
TTTTGGTGATGAGGAAAACCAGCTTTCTGGTGGGACTAATAGAGTTCAAACTTGCTCTTC
TACACCAAGAAACAGGAATACTATTGACGATGAGGGAAAGAAGCCAAATTTTCTCTCATT
CTCTGAAAGGCTGGGCGTTCCAGACTTCTTTTGCTTGGATGTTAGTAATATATTTTAATT
TTATCACTAATTGCCTTCAGAATAAATAAATCGAGTATTATCAGTGCATATTTTTTTTTT
TGTTATATAGGTATGGCGAGCGTCGATGGGAGAACTCCTAGGCACAGCGGTTCTTGTTTT
CATGTTGGATACTATAGTGATTTCCACTTTTGAAAGTGACACGAAAATGCCAAATTTGAT
CATGTCAATTCTCATAGCAGTTGTGATCACAATCCTACTCCTCGCGGTTGTTCCGGTGTC
CGGAGGCCATATCAACCCGGTTATCTCCTTCTCGGCCGCGCTCGTCGGAATTATATCCAT
GTCAAGAGCCATAATTTACATAATGGCACAATGTATTGGTGCAATTTTAGGTGCACTAGC
TCTTAGGGCAGTGGTTAGTTCATCAATTGAAGACACATTCTCACTTGGTGGTTGCACTGT
CACAATAATTGCACCGGGCCCAAATGGGCCCATTACTTTGGGCCTAGAGACGGCCCAAGC
CTTGTGGCTAGAGATATTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTA
TGATCATCGACAAGCTAAGGCTCTTGGCCATGTCACTGTCTTGTCCATTGTTGGTGTAGT
GTTAGGCCTTCTAGTGTTTATCTCGACCACGGTCACCGGGAAAAAGGGTTATGGCGGGGC
GGGGATTAATCCGGCGAGGTGTTTGGGGCCAGCTATTATTAGAGGAGGTCACCTTTGGGA
TGGACATTGGATCTTTTGGGTTGGGCCAACTATTGGTTGTGTGGCCTTCTATGTGTACAC
AAAGATCATTCCAGCAAAACATTTCAATGCAGAATATGGATACAAACATGATTTTGTTGG
AGTTGTCAAGGCTTTGTTTGGGTCGAATGTATAAAGGCCCAGATGCAATAATGGGTTTAT
ATTGATGTATTTAGTTTTGGGTTTCCTTTTTATGGGCCGATAATAAACTGTTTAATGCGC
CTAGCCTAATAGGACTCAATAGAATATGGAAAAATTACAGAAATCTCACATTTTAGTTTA
CTTATTAACATAATCCCCTATAAGTTTTACAAATCTCCAAAATCCCTCATTTTCGCGCAT
TAGATTAGTGTATCTCGCGCATCAGATTAGTGTATCATGTATAAAATGTAATGTATCTTA
TTTAACGATTAATGTATCAG
