Microarray Probes on PGSC0003DMT400068624
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50661_PI426222305 |
JHI_St_60k_v1 |
GGAAAGTGCTTTAGTTACATGTATATCCTTCTGTTGACTTGATTGTTGCAATCATATGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068624
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068624 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23170.1 |
+1 |
4e-157 |
458 |
223/289 (77%) |
Auxin-responsive GH3 family protein | chr2:9864125-9866502 REVERSE LENGTH=595 |
Transcript Sequence (1106 bp)
>PGSC0003DMT400068624 1106 pgsc_dm_v3.4
CTACTTATTGTGGATATAATTGCAACAGGTGCAATGGCTCAGTACATCCCTACGCTCGAT
TATTACAGTGGTGGTTTACCAAAGGCATGTACCATGTACGCATCGTCCGAGTGTTATTTT
GGCCTTAATTTAAATCCAATGTGCAAGCCATCTGAAGTATGTTACACTATAATGCCCAAT
ATGTGCTACTATGAGTTTATCCCTCATGACTCAACCAATCCTCGTGACTCACCACCCCGT
CTCGTGGACCTAGCCAACGTAGAAGTGGGGAAAGAATACGAGCTCGTGATCACAACCTAC
GCTGGATTATGTCGTTACAGAGTCGGTGACATACTCCAGGTCACGGGGTTTCACAACTCT
GCTCCTCAGTTTAAATTCATAAGAAGGAAAAATGTGCTATTGAGCATTGATTCGGACAAA
ACTGATGAGGCCGAGTTGCAAAACGCTGTTGATAGCGCTGCTGCAATTTTGCGCCTGTAC
AATACTAGCGTGGTCGAGTACACTAGTTATGCCGACACTAAAACCATTCCGGGACATTAC
GTTATTTACTATGAATTACTTATTAAGGACCCAACCAATTCGCCAAGCCACGAGGTTTTG
AACCAATGTTGTTTGGCTATGGAAGAATGTTTGAACTCGGTTTATCGACAGTGCCGAGTT
GCAGATAACTCAATTGGACCACTTGAAATTAGAGTAGTGGAAAATGGTACATTTGAAGAG
CTAATGGACTATGCAATTTCTAGAGGTGCATCTATAAATCAGTATAAGGCTCCTAGGTGT
GTTAATTTTACACCTATAGTGGAATTATTGGACTCCAGGGTTATTTCAGTGCATTTTAGT
GCAACTGCTCCTCATTGGACCCCAGAACGACAGCGTTTACAAGTGTAATGATGAAGTCAA
TTCAAGTCATGATCAAGCCCACATGAGTGGAATAAAACCTTTTTTTTTTTTGTTCTTTTT
GTATCTTTATGTGTAGTATTGAATATTCAAAGTTGATATTAATTAGTCAAACTGCTCATG
GAAAGTGCTTTAGTTACATGTATATCCTTCTGTTGACTTGATTGTTGCAATCATATGTGT
TTTCTTCCCTTTTTTGCGGCTTTTTT
