Microarray Probes on PGSC0003DMT400068507
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37009_PI426222305 |
JHI_St_60k_v1 |
CTGTGGTGAGAGTTTCAACTTGGATGTAGAACAAGAAGACAATAGCAGAAATTAAAATTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068507
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068507 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G08250.1 |
+1 |
1e-19 |
92 |
106/405 (26%) |
GRAS family transcription factor | chr4:5196787-5198238 FORWARD LENGTH=483 |
Transcript Sequence (1765 bp)
>PGSC0003DMT400068507 1765 pgsc_dm_v3.4
AAACAGTGTAACACAAACCTACAAAAAAATAAGGAAAAAATTTCTTCTTCCCTTGTAAGA
AAAAGCATCAAGAAGATGATTCAATCAGAGATTCTTCACAACTCATGGTCTTCAACTAAC
CAAATTCATCCTTTTTATGAATATCAAAATCATGGTGTTTCTAATTATTCTTCACTTAAC
TCCAAAGATCAAGATTCCTCTGAAATTTCCTTCTCAGATTTCACTTCCCTTTTCTCTGAT
GATGTTCTTACTGATCTTCCCATGGATGATATGGAGTTTGTTGATGTCTCCCGATGGTTA
AACGATAGTGAAAGTGAAGGAAATGAAAATATGAAAATCACTTCAGAGACGAAAAAAGAT
GGAGATTCATGTAGTCCTGAACTTTCAAGCATATCCATTGATACCTCAACGACAATACAA
TCAAGAAACGATGTTGTTTCACATGTACTTCAAGGAAATAGTAGAGAAATGGATAACCAA
ATGAGAATTCATCATTTATTGTCAGTTTATGGAGAGGCAATGGAAAATGGTCACAAGGAA
CTAGCAGAAGTGATCATAAGAAGCATAAAGGGGAAAATAAATCCTTTAGGTGAATCGTTG
GAACGCGTTGCTTCAAACTTATTCCAGCAAACAGAAGAGGATCAAGGAAGTTACTTGAGA
CAAGAATCAAACAAGATTATTGAAGCAGCATTCAAAGCCTTCTATCAAATTTTCCCATTA
GGGAAATTTGCTCATTTGGTTGCTAACTTAGCAATTATAGAAGCTATGCCTGATGATGCA
CAAACCATTCACATAGTAGATTATGACATGGGAAAAGGGATTCAATGGCCTCCAATTATT
GAAGCCATGAGCCAAAAAAGAAAGATTTTGAGATTAACATCCATAAAGAAAACAGGGGAA
GAATCAATAAGTGATCATTGGAGATTTGAGGAGACAAAAAGAAGACTTCTTGATTATGCA
AATCCTTTTGGCCTAACATTACAAGTTGAGGAGATGACATTTGAAGAATTGGCAAGTGAA
TTGAGAAGAATGAAGAAAAGGGGTAAAAGGAGTGAATGGTTGGTTTTCAACTGTATGTTT
CAATTCCTTCACATGGGGAAAAGAATGCGTAGAATCGAGGCGTTGGAGTTTCTAAAACTA
GCTAAGGAATTGTTATTAGCTTATTCTTCTACACACAGAGGACTTGTCACTTTTGGTGAT
GGAGAAGCAATGGACAATAGTCATCAAAACACAAACTATACTTTTTCTTCATACTTTAAC
AAGAATTTGATACATTACCAATTGATTTTTGAGTCATTGGAATTGTATTTTCCATCTCAT
CTTGCACAAGCTAGACTTGCTATGGAATCCCTTTTTCTAGCACCTCAAGTGTGCTCATTT
TCTTGGTTTCAAAACTGGGAAGAGATGACAAGTGTTTCTGATTCTTGTAGTGAAATCGGG
TTGCAAGGTATGAGAATAAGCAAAGAAAACTTATTACAAGCCAAAGAAGTGGTGAATGAA
AGAGAAACTCCATTTAATGTGAGGATTGAAGAAGAAAGACAGCATGAGATGGTCTTGGAA
TGGAAAGGCATATCTGTGGTGAGAGTTTCAACTTGGATGTAGAACAAGAAGACAATAGCA
GAAATTAAAATTCATTCTCTGTCATTTTCTTTTACTTGTGTTTTCCTATCTAGTCTCAAA
AAATAGGCAATATTAATATTAGCATGTGAGTGTACTTATGTTGTATATAGTTGTTAAAAC
CCACAATTGTAAATGACAATTTATG
