Microarray Probes on PGSC0003DMT400068386
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40196_PI426222305 |
JHI_St_60k_v1 |
CAAATGCTATTCAATCCAGGAGCTGGCTCTTATCATGCGTGTAAGAGAAGAAGAGAAGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068386
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068386 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G32740.1 |
+3 |
2e-44 |
161 |
117/325 (36%) |
SBP (S-ribonuclease binding protein) family protein | chr1:11844883-11846082 FORWARD LENGTH=312 |
Transcript Sequence (1769 bp)
>PGSC0003DMT400068386 1769 pgsc_dm_v3.4
TGAGAAACACGAGAGTCCCTCTTGCCGTGTTGAAAGAAAAGCCAAAAGAAACAAAGCCCA
CGCGAAAGAACAAGAGAAGAGCAAGGAAACAAGGAACCACAATAAGAGGGGCTCTCCCTC
TCCCATTTGGACTCATTCGTTTTGATCGCATCTCCTTTTCTCTCCCATAAAAAGCATTTA
GGTGAAGCAAAGGTAACTACTACTAAAACATAAAAAGTTTCTTAGTGTGGTGTAGCATGG
TCATGTTGGTGTTCTTCATAATGGGTTAAGGTTGGCTTCTTCTTCTCCAACATAAAAGAA
GAAAGAAAAAGATTCATTCTTCTCTCTCGAGAATCAAATAAAGTTTCTTTCTTGTCTTTG
AATACTTGTCTTCACTTGTTGATATTTCCATAGTTTGGGGCATCTTCTTCTCATTCATGC
TGTTTATGTGTTTGCCTTAATTAGGCCTTCCCTTTCTCAACACTCTCTTTTACCAATCAA
AATCCCTTCTATATATATATATATACATATCTTTCTGTTTTGATCATTCTTCAATGGCTG
TTCAAGCTCAATACCCATCTAACGCTCACCTCTTTAACAGGTACACATCTCCCTTCCCTC
TCAAATTTATCTTTTTCTTTTTCTCATTACTAGTAACTTAATGAAGGTTTTTCATTGATT
GCAGAGCTGTGCAAGAACGAAAGAACCCACTTGGCAACGATGATTATTCGTTGCAACCTC
AACCTGGTGGAGGATCAATTCTTGATCACACACAAATGCTATTCAATCCAGGAGCTGGCT
CTTATCATGCGTGTAAGAGAAGAAGAGAAGTTAGCACCACCACTGCAATGAATCCGTCAA
TGCAATCTCAGCCGCAGCTGATTGACCTCACTCAGCTTCATACAAATCCGCAGCAACCAA
ATGTTGTCTCCACCGGCCTCCGTTTAGCTTCCGGAGAACAGTTACAACAACAGCATCAGC
AACACCAATTACATCAACAGTATCAGAAGCAGCAACAACAAAACCAACACTCTCTTTCTC
CTCAATCTTCTCAATCATCAGCTTTCTATTCCATATTCACAGAAGACATATCTACTATAA
TCAAACAACACCGCGATGAAATAGAACAATTCCTCCATGTTCAGAGAGAACAATTAAGAC
GGACATTAGAGGATAAAAGGCGAACACACTATCGTGCTCTGATTGGAACCGCCAAGGAAT
CAATGGCACGGCAGCTGAAGGAAAAGGAAGCCGAGGTTGGAAAAGCGGTTAGGCACAACG
CCGAGTTAGAGGCGCGTGCAGCGCAGCTGAGTGCAGAGGCGCAAGCCTGGCAGGCAAGGG
CTAGGGCAGAGGAATTCACCGCAGCAACGCTACAGGCACAGCTGCAGCAGGCGATGATGA
ACGGCGGAGGGTGCAATGCGAACCTCCCGGACGGAGACATCGCCGGCGCCGGCGAAGCTG
AGGATGCTGAATCGGCCTACATCGATCCGGATCGAGTCGTGGAGTCAACCGGGCCGAGTT
GCAAGGCTTGCCGGAAGCGAGCTGCATCGGTGGTGCTTTTGCCGTGCCGGCATTTGTGTG
TGTGTACAGATTGTGACGCTGTGGTACAAGCATGTCCACTCTGTCTCTCCATTAGAAGCT
CAAGTGTTGAAGTCTTCCTGTGTTAGAAAAGCCCAATCTTTGGCCCATTTATTTGCAGCC
CAGGCCCAAATATCATGAACTAAGAAAAAGATTTATTAACTATTGTATTCATGGTACTTT
TAAGTAAAAAAAAAAAATGAATATAAAAG
