Microarray Probes on PGSC0003DMT400067833
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33640_PI426222305 |
JHI_St_60k_v1 |
GCTTGGAGTGCTAGGTTTTGCCTAAGGAACATGCTCTGATATTAAATTGTAAAGAGAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067833
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067833 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18390.2 |
+2 |
1e-167 |
507 |
298/640 (47%) |
Protein kinase superfamily protein | chr1:6327463-6329935 FORWARD LENGTH=654 |
Transcript Sequence (2702 bp)
>PGSC0003DMT400067833 2702 pgsc_dm_v3.4
TCTCAATTTGGTGTTCTCTTCCAAACCTCCTTTCTCTGTCCCTTAAATCCTCATCTCCTT
TCAGCTTAGCTCCTGAATAAAGCTCTTTTGCCACTATTACCAGTTAGCGCCTCTCTTTCT
AGGTGGTGCTAGTTCCCTTAATCAAACAGAAATGCATCCTTATTTTTTGCTCTTCACTAC
CACAATATTTATCTTGATCTATATACCCGGGTCTTTCTGTCAAGATGACGAGCGATACAG
GAGTTGTGGTGAGGAGTTTCGCTGCGGCAGCATGGATATAATTTACCCTTTTTGGGGAGG
GAGACAACCAGAGTATTGTGGTCATCCAAGTTTTGAGATCAAGTGCGAAAGTAACATACC
CAAAATTGCAATTGAATCAACAAGCTACGAAGTGATAAATATCAACGCTCCTAATCGAAT
TGTAACCCTGGCTCGGGATGATTTACTGAGTAGTATTTGTTTGGATAATCCTAAGAATGC
CTCCTTTGATTTAAACACTTTCAGCTATGTTTCTAGTGACCTGAATATTACTCTGTATTT
CCACTGCACCGTCCGCCCTGGTTTGCAATTACCACCTTCGCCTCCAAATAGGTTCAATTG
CGATAGCAACATGTTTGGTATATACACGCTGATCAACGTTCCCTTCGACCTTAGTCTGGT
AACATGCGAGGAAGAAATAATAGCTAGGGTCAATCAAACGAGTGCTGTGGCATTAGCCAG
TCCTACAGCTTCCGTGGATGCTCTGACAAGAGCCATTGCTGGCGGTTTTTCAGTTAATTG
GACGGCAGGTATTGACTCTAAGTGCCAACAATGCCGCACGTCAGGTGGAAGATGTGGATC
CAATCCAGATTCTGGAGACTTTGCTTGCCATTGTGTAAATGGTACTCATTCAAACGACTG
CTACGACGGACAAAACCAAGCCGGCGATAACCGAAAGAAAAATCAGATGCCACTTGCAGT
AGGCATTAGTGTAGGAGGTGCTGTACTTGCCAGCATTGGTGTTGGGTGGCTAGTCTTCTT
CTGCAGACAAAAGAGAAAGCGGATTGCATCACAGGCTTCACTTGCCCAAACCGAAAGGAA
GGATCTTCCAATTTTAAGTTCAAGCAACGGCCTGAGTTCCTCTTCTACTCCTTCTTCAAC
CACTTTCACCAGAAGCATTCCCTCTTATCCCTCTTCCAAATCTGAAGCTGATTACGGGAG
GGGAAGCTCCTACTTTGGGGCTCATGTCTTCAGTTTTGCTGAACTTGAAGAAGCCACGAA
TAATTTTGATCCATCTAAAGAACTTGGGGATGGTGGTTTTGGTGTCGTGTACTATGGCAA
ACTCCATGATGGTCGCGTGGTTGCAGTCAAGCGCTTGTATGAGAACAATTTCAAGCGTGT
GGAGCAGTTCATGAATGAAGTAGAGATTTTAACTCAGCTCCGCCACAAGAACCTAGTGAT
GTTGTATGGGTGTACATCTAAACGAAGCCGAGAGTTACTGCTTGTTTATGAGTATATACC
AAACGGGACTGTGGCAGATCATCTGCATGGTAAACGGGCCAAATCTGGCTTACTCTCTTG
GCCTATCCGAATGAACATAGCCATTGAGACTGCTGAAGCTCTGGCTTATCTCCACTCCTC
AGTTATAATACACCGTGACGTCAAAACCAACAACATTCTGTTAGACAATGATTTCCATGT
GAAAGTTGCTGATTTTGGGCTATCAAGACTGTTCCCAACTAATGTCACACATGTCTCTAC
TGCTCCACAGGGTACACCAGGCTACGTTGATCCTGAATACTACCAATGTTACCAGCTCAC
TGAAAAGAGTGATGTCTATAGTTTTGGGGTGGTCTTGGTAGAGCTGATCTCATCATTAGA
AGCTGTGGATACCAACAGGCACCGCCATGATATTAATTTGTCTAATATGGCTGTCAACAA
GATCCAAGGCCATTCAATACATGAGTTAGTTGATCCAAGTCTTGGATTCTCAACAAACAG
CTCCGTGAGGAGGATGACTACATTAGTCGCTGAGTTAGCTTTCCGATGTCTGCAACAAGA
GAGAGATCTGAGACCTTCAATGCAAGAAGTGCTGGAGACATTGAGAGGCATCCAGAATGG
AGAGTCGAAAGCACACAATGCTGAGGTACTGGATATTGTGGTAGATGATGTTGGGCTCCT
AAAGGAGGGCCCCTTTTCTTCTCCAGATTCAGTTGCCGCTGACAAATGAGTTGACAGCTC
CACACCACATTCTAGTGGATGAAATATCTTTATCAGGTTGGTTGAATTCAATGCTAGGTG
TGGAAGCAACTACTATTTTGGCACTTGTGATCAGTGTCATGTTTGGGCTAGTATCTCGCG
TCTTCCATAGATAATTAATTTCTTATTTTTGCTTACATATAGTTATCTTGTTATCGTCAA
TATTTTCTGTGGGAGATTATCTAAAACTGCTTTTCGCGTAAGGCAATGTATATAAATAGT
GAATAGGGCTGCCAACATTCTAGTATACATATGCATCTTTTGCTCTTTGTACATCAGGTT
TTGTTTCTTTACCGACCTTATGGTCCTTCTGTTACCTTAAAGTTCATTTATGTTGAGGAC
ATGAAAATCATATGTAACAACAATAATGCACTGCAGCAGAACATATTCTAAGCCTATTCG
TAGCTTGGAGTGCTAGGTTTTGCCTAAGGAACATGCTCTGATATTAAATTGTAAAGAGAA
AA
