Microarray Probes on PGSC0003DMT400067738
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42065_PI426222305 |
JHI_St_60k_v1 |
GGATGGGAAAGTTTTGAGTGGGAAGGATAGTTTGGTCATTTTACAAGAAGTTATTGAAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067738
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067738 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27310.1 |
+1 |
2e-76 |
243 |
124/273 (45%) |
F-box family protein | chr2:11683954-11684967 REVERSE LENGTH=337 |
Transcript Sequence (1144 bp)
>PGSC0003DMT400067738 1144 pgsc_dm_v3.4
TCAAACTCCAAAAACTTGCAATATCTTTATTTTTTGAAATATCACATACTAAATAGTCTC
ATGTCATCTTGTTCCACCACCACTATCATGGCGGAGGACGACGGCGGAAGGACGGCGATC
ACCGCCGTCCATCCCGACATCATACAAACTTTGATTTTAACGAAACTCGACGGCCCAACT
CTTATCTCCGCCAGTTTCGCTTCTTTGCAGCTGCAAAATCTTTGCTCCGACGATGAACTT
TGGCGAAAATTTTGTAACTCTTCTTGGCCTTCTACTTCCGACCCACTTATCAAAAACGCT
GTTGCAGCCTTTCCCTCCGGTCACCGTTCACTTTTTTCCGATTCCTTTCCGTCCATAACC
CACAACGAGCCAAAACCCATTACCGGAAACAACTCGAAGCAGTATTTTCCGTCGCCGGAG
TTGATATCGGCGGTCGATATTCACTTTGAGGGAAATTTATTGTACTCGAAAGTGTTGACT
AACGAGACGGAAAGCGGGTGGTTCATGAGTTCGCCGTTCAGAATTGAGCTATTGGGTCAT
AAGGAAATTGTTCCGACGCCGGTGAAATTCGACGGCGAGGATGGAAATTGTAAATTGGAG
TTACAGAAGATGAAATTGAGCTGGATTTTAATTGACCCATCGAGGAATCGAGCGGTGAAT
GTATCGAGTTTGAACCCGGTATCGGTCCAACGACATTGGTTAACCGGAGAATTGAAAGTT
CGGTATTCGACGGTGATGAGGTCCGGCGCCGGCGCCGGCGAAGGGTTGGTTCAGTGCGGG
ATAGTTGTCACGTGCGAAGGTAAAGAAGGAGGCGAATTGCACGTGCGAGAAGTAAGCATG
CAAATAGAGGATATGGATGGGAAAGTTTTGAGTGGGAAGGATAGTTTGGTCATTTTACAA
GAAGTTATTGAAGGAGGAAGAAAAAAAAGAAAGGAAAATGAAGAAAAAGAAAATTATGAG
AATTTTTTGGAATTAAAGAAAAAATGGAAGGAAAATAAACAAAAGAAAGAAAAAAATTTG
GATATGATGTGTATAGCGAGTGGAATTACAATTTTAATTTCATTTTGGACTTTAATTGTG
TTTGGTTCAAGAAGTAATGGTAGTTATTTTACTTAGAAATATGGTGGGAAAAAAAAGAAT
GATA
