Microarray Probes on PGSC0003DMT400067667
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33158_PI426222305 |
JHI_St_60k_v1 |
CCTCACCTACCTTGGTCTCAAGTTTGAATCAAACAAAGAAGAAGAAAAAGAAGAAAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067667
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067667 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G31420.2 |
+3 |
2e-130 |
406 |
215/404 (53%) |
Zinc finger protein 622 | chr4:15245987-15247763 REVERSE LENGTH=405 |
Transcript Sequence (3306 bp)
>PGSC0003DMT400067667 3306 pgsc_dm_v3.4
TTTGAATCAAACAAAGAAGAAGAAAAAGAAGAAAAATGAGGAGTTTAATTTGTAACTGTT
GTAATAAGGAATTTTTTGACGAAAATGAGCAAAAAATTCATTACAAATCAGAATGGCACA
CTTATAATCTTAAACGCAAGGTTGCTGGAGTTCCTGGATTGACAGAGGCACTCTTTATAG
CCAGACAGTCTGCACTTGCAGAAGAAACTCCATTGCTATATAGTTGTGTACATTGTGGCA
AAGAATATAGAAGCTTTAAAGCTCATGCTCAACATCTGAAATCTAAAACTCACTTAGCAC
GAGCTTCGCAAGAGACAGGTCATCATCACGATGATAATAGCGTTATTAGTGGAAGGGATG
AGAGCGAGTGGGAGGAGGTTGATCAAGAGGAAGAGATCGCGTGTGAAGACAATGACTCGT
TGAGGCAACTAAAGATGAATGGAAGTAGTACTAGTAATGGTGTTATGGATGATGAAGGTA
GCGATGTTGATGAGTTGGATCCGCGTTGTTGTTTCATGTGTGATTTGGAACACGATACAG
TAGAAAACTGTGCGGTCCATATGCACAAGAAGCACGGGTTCTTCATACCTGATATCGAGT
ATTTGAAGGATCCTAAAGGCTTCCTCACCTACCTTGGTCTCAAGGTTAGAAGGGATTATA
TGTGTCTGTATTGCAACGATAGATGTCGTCCTTTTAGTAGTTTGGAAGCAGTTCGGAAGC
ATATGGATGCAAAAAATCATTGCAAGGTGCATTATGGTGATGGTGGTGATGATGAAGAGG
CGGAATTAGAAGAGTTTTACGACTATAGAAGCAGCTATGTGGATGCAACTGGAAAGCAGG
TTGTTTCATCTGAAGATTTTAACAACAATGTAGAACTAGGAAGTGGTGGATCTGAACTCA
TAATAACTACAAGAACCGATGATCAATTGTCTGTTAAATCAATCGGTTCAAGAGAGTTTT
TGAGATATTATCGCCAGAAACCAAGGCCTACGCGTACTAATGATACAGCTATAAGCTCTG
GTTTAGCTTCAAGGTAGCGAAGCATGGGTCTAGCAACTGTGTAATCGAGGGAGCACAACG
TTAAAATGAAGGTGTTGAAGGCCATGAATAGATGTGGTGTGGATGCTATGCACTCTGGGA
TTGGCAGGAAAAGCAATGTTATTCGAAACCTCCCTAAAAATATACCATATTTAGTCTCTT
CCCTATGGATTATCTTGCAATATTTCCTACGAGTGTTATAATATCTATTAGTGTGTATAG
TTTTCGAAAGGCATAATACATAAACATGCCTCTTATGTATGAATGTTTGGTAACCACACA
CCCCCAACCCAGAAAAATAAATAAATAAGGCCAAAAGGTTTAAAAACCTCAAAGTTATAA
TGAGATAGAGAGTGGTGAAGTCTCCTACATGAACTTACGAATAAATACTACACAACGTGG
TCTTTCGAAAAAAAGAAGGGAAAGATGAATCAAGGATCCTCCTACAATAGCTTAAATTTC
TTCTTGAAGTAAAGCTAATATACAACAATTTCAGGTCTACAGACTGCCTGGTCTACATAT
ATCATCACTTACCTCTTTGCTCTGGTGGTCTTTCGAACATTTCTCACCGGTCTCTTTCCT
TGTTGCTTCACAACTTTCCCGTTCTTTGCCAAAACTGGTCCCTCCTGCGACAAATCTTCA
CTAGGAATGGAAGCAGCAGGACTCTCTATTGTTTCATTCATGTCTGGTACATCCACAGCA
GATTCGCTAAGAAACTCACACTTATCCGCCACTTGGTGAGATTTAGTCGACTTGTCCTGA
CTTGACGTTCCTGGTTTTGGCTTCTCACCACCAATGTGTGAGTCGTTTTTTCCTCTACTT
TGACCTGCAGACAAACTATCGAGGGGAAAAACCAGCATTATTGAGATTCGAGCTCTAGAA
AAATTAAAGAGCTTTATCATTCAATCTTTTACCTAGCTTCTAATGATGAATAGCCATTAG
AACTTGGGGCTAAATTCAGTCGAGTCACTTCATGTGCGTCAGAGGCAGTTATATGAAGAC
CTGGACTTGTAAAAATGGATAAATATAAGAGAAATTAAATTGGCCATAATGGAGAAAAAG
AGATCAGCAGTTAACTTCCTCGCAGATCATAAGGAAAAAAGAGAGACAGAGAAAACAGCA
TATAACAAAAGTCACTTGCATATTTTAGGACATAATTAACCAACTATACACGCCGCCATA
ATCACAAGAAAGAGCAACAGAGGAACAAATGTGAATTGAGACTCATTACTAGTCTTGCAC
ATGATACACAAGCTATTTTAGTATTGGACGCACATGTTTTACAAGAAGATATATTAAATC
TAGAACTATAGTTCCACTATGTGAGAAGTGCTAAACATCTGTAGACTCAGCCTAGATCAT
CCACCAGTAATGGTAGCCAAATGCTAGTGGAGCCTGTCAGTCAAGCAGCTTTGTAAACTT
GACGATCAATGCAGGGTTCAAACTAAGAGCTGGATTTGCTTGTCAAGTTTACAAAGCGTC
ACAAAATTACCAACTTGTCGAGCACTAGGATTCAAAATAGCTCTAAACTAAACCAGATAT
CAGAATCCATTACACCACATTGGTCACAAGTTTTCCTGGTTTGCATCTAGTTCCTTTACA
CCCATAAGTCAGAACTACAAGATATAGGATGAATTCAAATTTGTATTCCTCCATGTGCCA
TCCTGACCATTCTAGGCCTGCCATTGGTTACATCGTTGCAGTCACCATGGTTCTCTCTCA
CATATCCTCCTTGCTCCCCCAATCAACAGACTAATATTGTCACTATCATGGCTGTGATTT
GTGGTCCCTGATTTATATCCACCATTGGCCTGACATGAGAACTGCTTAGGAGATAGGTAG
CCAAAAAACCAACTTCCACCTTCGAAGACACTAGGGAAGTATCAAATGCCTCCATCTTTG
TTTACGTCTCTATCAGACCATTTAAAAGATAAACCCACATACCTAGTAAGCCAACTTTCA
ACTCCTATCTGACCAGGTAATAGAAGGCAACAATTTTGACTTGTCCAGATGATCAAATAT
GAATTACATGTCACTCGGCCAACTTCATATATTTGTGTATTGGTAAGTAGTAATAAGTTT
AATTCTGAACCCATTACTGCAAATTAGCTTCACAACATAAAACAAACAGAAAAAATCTTT
AAAAATGGCGTCAAGTACCATCATTGTGCTCAGAGGGGAAAACTGAACCAGTATGCATGT
AAGATTCACGAGAAGCCTGCTCACCAACCTGAACTGCCTGTAAGTTTGAACAGTATGAGG
ACAGAC
