Microarray Probes on PGSC0003DMT400067359
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38213_PI426222305 |
JHI_St_60k_v1 |
AAGAAACCAATCAAGCCAGTCCATACCTCGATTCGCCTTGTAGTTTCGTGGAAACAGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067359
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067359 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22104.1 |
+3 |
7e-147 |
436 |
244/521 (47%) |
Phototropic-responsive NPH3 family protein | chr3:7789814-7792179 FORWARD LENGTH=506 |
Transcript Sequence (1640 bp)
>PGSC0003DMT400067359 1640 pgsc_dm_v3.4
AGGTTATATGTTCGTATTCAGGGAGAATAAACAAATTGATAGGAAAATCGAAACGAGGGA
CGCGTTATCTAAAGGTGATATTTCATGACTTTCCTGGTGGAGCTGAGAGTTTTGAGCTAA
TTACAAGATTTTGTTACAGCAAAGGGAAGGTTGAGATAAATTCTATTAATGTTTCAACTC
TATATTGTGCTGCCTCTTATATGGAAATGGAGAAGTCTGTATCCGGGAACCAAAATCTGT
TTGAACTAACTGAGAAATCGCTCGAAGACATTAGGTATTGGACTTGGTCTGAGCTTCTTG
ATGCTCTAAGATTGTGTCAAAATTTGATGCCTGTGGCAAGCTCTTCCGGTGTAATTGATA
AATATCTGGATTCTCTTATTGGGAGGGTTGCGTCTTCGTGTGAAACCAGCCCTTGTCCGT
CAACTTCTTCTGCTGACAGCTCTGGATTTCGGTTGTCATGTGATACGAAAAGTACAGAGA
GCTTGAGAAATAGTGCATTTCGGGCAACATGGTGGTTTGAGGATCTTGCTTCTTTTGAGC
CCTTTTTGATAGAAACTTTGGTAAAGCAAATGGTATCCAAAAACCTTGACCATGGGATTC
TTAGTAAGTTCCTGTTCTATTACCAAAAATCAAGATTTTCAGCGGCCAAAACGATGGACG
AGAAATGCAAGACCATGGAGACTGTTATTGAGATGCTTCATTTGCTAGATTTAAGCTGCA
TTTCCTTCAAAACCTTATTTGGAATGCTTCGAATTACTCTGAATTTAAAGATAAGCAAGT
GCTCCAGGAACAAGTTAGAGAGCATGATTGGCTTCCAGTTGGATCAAGCGACTTTGGATA
ACCTCCTGCTCCCGTCACCTGTTGGATCGAGTTATTTATATGATGTAAATTTAGTTCTTA
GGTTATTGAAATCATTCATCAGCAAAGGGGCATGTTGTGTTCCGTTAACTCGATTGAGGA
AAGTTGCTAGCTTGATGGACTTGTACATAGCAGAAGTAGCTCCTGATCCATGCCTAAAAC
CTTCCAAGTTCCTTGCCCTGGTCAGGTCGCTCCCCGAGTCTGCTAGGGACTCATATGATG
CAATATACCATGCCACAGTTATGTATCTCGAGGTCCATTCAGGGTTATCCGAAGAGGAAA
AGATGAAAGTATGTAGTGGACTGAGCTACGAGAAGCTGTCATCTGAGGCTTGTAGCCACC
TTGCTTGTAACAAAAAGTTCCCTTCAAAATCTGCTGGACAAGCACTCATAACTCAGCAAG
TAAAGCTCAAAAGCTTACTTCAAGAAACCAATCAAGCCAGTCCATACCTCGATTCGCCTT
GTAGTTTCGTGGAAACAGGAAGTCCAGGACATGAAGATCAACAAATCGTGCTATACGCAG
GAAAGCTAGATCTTTCAACAGAGAATGAGAAGCTCAAAGAACATTTACAAGGCATGCAAT
GGAGAGTACTAGAATTGGAAAAAGCTTGTAGGAAAATGCAAAATCAAATGGCAAAGATGT
TGAAATCAAGAATATCAAGCCATAATAATGCTAGATCATTACCTAGGCTATGTTCTTGAT
TTATTTACTTTATCAATATTTATATTTTTTGAAATGTTGTATGTAAATAGCAAAGTGTAC
TATAACTACTACTCTAGCTG
