Microarray Probes on PGSC0003DMT400066955
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17844_PI426222305 |
JHI_St_60k_v1 |
GAACATACCAGCAAGTTACAACAACAACTTCTTCACCAATCTACTTCTCCAATGGGTGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066955
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066955 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G02065.1 |
+2 |
5e-65 |
215 |
140/316 (44%) |
squamosa promoter binding protein-like 8 | chr1:365625-367149 FORWARD LENGTH=333 |
Transcript Sequence (1369 bp)
>PGSC0003DMT400066955 1369 pgsc_dm_v3.4
AAAAAATGCTCTTTCTTTAAAAAATATTTACAACTATACATACATATAAGTCCTATAAAG
CAACACCTATTAAAACTCTTCACTGAATGCTGAACCGTAAAGTCTTTAGCTGCAGCTTTT
TCCACTACATAAAATCTTCTTCTACTTAAAGCTGACAGATTTCCTCTCCCATTCCTCCCA
AATCCCAACTACAAAATATTCCAAACTTTTTTTTTTCTTCATTTTCAAAATTCCACCAAT
CCTTTTCCATTTCCCACTCTATTTATCCACAGGTTATTTGGCTATCAAAGTGAGGAAAAA
AAAATTAAGAAAAATGTTGGACTATGAATGGGAAAATCAATCTGCTTTTATGTTTACAAG
TGATCAAAACACTCAAGAAGAAAATGACCAAAATAACAATCAATTTTTGGATCCTCAAGC
GCATTTTCCTCATATAACAAATTACCAACACCAGCAGCAGCAACAACAACAACAATTACA
GAATCCGCAATTTCCCCAATTTCAAGCAACTCCAAATAACACTCATTTAATTAGCTCCAT
GTACGATCCACGCGCTTATGGCGTTTCGTACACGCAAACACACGAAACATCCATGCTTTC
TCTACAACCAACTGGTGGATTTATGGTAGTGCCGAAGAGCGAACCGCAATTTGGAGGCGG
AATTCATGATTTTTCAAGTAGTAGTAGTCGGATTGGGTTGAATTTGGGCGGGAGAACGTA
TTTTGCTTCGTCATCGGAAGATGATTTTGTGAATCGGCTCTACCGGCGGACTCGCGAGGT
TGATTCCGGTTCAGTGAACTCGCCCAAGTGTCAAGCTGAAGGTTGCAATGCCGATCTCAC
TCATGCAAAGCACTACCACCGACGGCACAAAGTGTGTGAGTTTCACTCTAAAGCCGCCAC
CGTTATCGCCGCCGGTTTGACTCAGCGATTCTGCCAACAATGCAGCAGGTTTCATGTTCT
GTCGGAATTTGATAACGGGAAAAGAAGTTGCCGGAAACGGTTAGCAGATCACAACCGGAG
AAGGAGGAAGAATATTCAGCAAGAAAATAATAAAAAGCAGTCTCAACCTTCATCAAAGTC
TCGAGCTGAATCAGGAGCACAATCATCAACAGTGACAGTGGCTATATCACCACCAAGAAT
TCCAGTGGATGGTTTTAGGCAAAGAACATACCAGCAAGTTACAACAACAACTTCTTCACC
AATCTACTTCTCCAATGGGTGACTAAAATATTTTTATTTTTAATAATTAATTATTATGAT
TATTATTTCAAACTTATGCTTTAATTGCCACAACAATCTAGTATATCTTAGTACTAATTA
CAATATAGGAAAGTTAATTTAGATATGAAATTATGATTAATGATGTAAT
