Microarray Probes on PGSC0003DMT400066123
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14678_PI426222305 |
JHI_St_60k_v1 |
TGTGGGAGTTCCTGTTGATCCCCTTGCTTTTGCTGGACTTTTAGGTATGGTTGTTACATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066123
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066123 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17870.1 |
+1 |
0.0 |
703 |
401/496 (81%) |
ethylene-dependent gravitropism-deficient and yellow-green-like 3 | chr1:6150036-6152185 REVERSE LENGTH=573 |
Transcript Sequence (2055 bp)
>PGSC0003DMT400066123 2055 pgsc_dm_v3.4
GGGGTTCCAATTTTTCAATTTCATTGTCACCTTCTGTAGAACACAGTGCACCTGTACTTG
TTCTCCAACTTTCTAGATGTCTCTCTTTCACATTCCACTCGAAATCTGCTCTTCCTTAAA
TGGATTCCACAATGTTTTTCCATTTCCAAGAACTCAATTTCAGTTCAGAGCATTTTTCAT
CACACCCACATGGCAACTCTTTCTGCTACTTCATCTTCTTCTTCTTCTTGGTCCCTCAAA
AACAGGAGGCCGCATTACCTACCTCCTATTTCTTCAATTTCCAAAAACCCAATTTGCCGA
AATACCCTCTTCTCGTTTTCCTCGTACAACCCAAAAAGATTGAATCTTTATGTTCCTTAC
AAAAAAAGATTGAATTTTTATGTTAAAGCTGCCGAAGAAGATGAACCCTCATCTTCTTCT
TCTGTGGCTGTAGCTTCAGAAGAAAATGATTCTCCAAAGAATGATGCTCATATTCAAGAG
GGTGAGAGTGGTGCTCAGCATGAGACTGAGTCTGAGAGGATAGAGAGGGAGAAACAGCAA
GAAATGGATTGGAAAACAGATGAGGAATTCAAGAAGTTTATGGGGAATCCCTCAATTGAG
GCTGCTATAAAACTTGAGAAAAAGAGAGCTGATAGGAAGCTGAAAGAGCTTGATAGTGAA
ACCACTAGCAACCCACTTGTGGGCTTCTTTAAAAATTTGGTTCGTGTTAGTTTGTCCAAA
GAGAAAGAGAGGTTGGAAAAAGCAGAAGAAGCTTTTGTAGCTCTTGATCTTAATAAGCTA
AGGAATTGCTTTGGCTTTGATACGTTCTTCACGACTGATGTGAGGAGATTTGGAGATGGG
GGGATTTTCATTGGGAACTTGAGGAGGCCTATTGATGAAGTAATACCCAAATTGGAGAAG
AAGTTATCAGAGGCTGCTGGACGGGAGGTCGTCTTGTGGTTTATGGAGGAAAAGACAAAT
GATATTGTAAAGCAGGCTTGTGTGGTACAACCCAAGTCAGAGATGGATCTTGAATTTGAA
TCAACCAAATTAAGTACTCCTTGGGGATACATCAGTGCTGTATCTTTGGCCGTAACAACT
TTTGGCACTATAGCTTTGACCAGTGGTTTCTTCCTTAAGCCTGATGCTACGATTGATGAT
TACTTGGCCAATGTTGTACCCCTTTTTGGTGGCTTCTTGACCATTTTGGGAGTTTCAGAG
GTAACCACAAGAGTAACTGCTGCGCGCTATGGTGTCAAACTTAGTCCATCTTTTCTTGTT
CCGTCCAATTGGACTGGGTGCCTGGGTGTTATGAATAACTACGAGTCCCTGCTACCAAAT
AAAAAGGCTCTATTTGATATTCCAGTTGCTCGTACAGCAAGTGCATACTTGACATCGCTA
ATACTTGCAGTTGCTGCTTTTGTGGCTGATGGAAGCTTTAATGGAGGCGACAATGCATTG
TACATAAGACCTCAGTTCTTTTATAACAATCCGTTGTTCTCCTTCATTCAATACGTTGTT
GGACCATATACTGATGATCTTGGGAATGTGCTGCCTTATGCTGTTGAAGGTGTGGGAGTT
CCTGTTGATCCCCTTGCTTTTGCTGGACTTTTAGGTATGGTTGTTACATCTTTAAACCTG
TTACCATGTGGAAGACTAGAAGGTGGGCGCATTGCACAAGCTATGTTTGGCAGGAGCACA
GCTACATTGCTATCTTTCGCGACTTCCCTATTGCTAGGAATAGGTGGTCTAAGTGGAAGC
GTGCTATGTCTGGCATGGGGACTGTTTGCAACTTTCTTCCGCGGAGGAGAGGAAGTCCCA
GCACAAGACGAGATCACCCCACTTGGAAATGAGAGATTTGCTTGGGGTTGTGTACTCTTC
TTGATGTGTTTCCTAACACTTTTCCCTAACCTTGGTGGCACATTCTCTAGTTCATTTTTT
GGTGATCCATACTTCCGCGGTACTCTGTAATTTATAGTGTTGACTTGTACCAAATGTATA
TAAAGTTCTATTTTTTTGTTTGCTAAGATCAGTTAAGTTGTTCTCTCTTTACTATATATT
GAAGGTATAAATGCA
