Microarray Probes on PGSC0003DMT400066071
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51703_PI426222305 |
JHI_St_60k_v1 |
TCGTTCATAAATTTCAGGGGCGAGAAAGCATTTTGTAGCACAGAGTGTCGGTACAGGCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066071
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066071 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G74940.1 |
+3 |
6e-29 |
94 |
73/189 (39%) |
Protein of unknown function (DUF581) | chr1:28146284-28147065 FORWARD LENGTH=222 |
Transcript Sequence (1152 bp)
>PGSC0003DMT400066071 1152 pgsc_dm_v3.4
TTTCTCTTTATAATAACACCAACCTAAACCATGGGCTATCCAACAACTCCATCAATTTCC
TAAACCATCTTTTATAAAGAGCTCTCCAAAAACACCAACTTTTAGGCAAAAACATCTCCA
TTTCATTTCTCATAAATCCCAATTTGAACTAAATTTCTTCAATCATGATAGGCAATAGAT
CTAAGCCGGTGATCGGAAAACTCACCGGTGCAGCTTTTTCCGGTAGCCGGACGATGGATG
GTGCTACCAGCCCAAGAAGTCCACTTGATTTCAAGTTTCCATCACCAAGAGGCTTAAAAA
GCTTTGATTTCGGTGGAGTTGGATTAGCTATAGTAGCTGCACTAGAAAAGTCCGGTGGTA
AAAACGGCGAAATTCCGGCGAACAAAGCCGTTTACAACCGGAATTCAAACAGATCCCTTC
CAATTCCGGTGATTTCGCCGTCGAAAAATTCAGCTAGATTTAGACCAGAAATTGAGGAAA
CAGAGATGGATAGTTTTGAAGAATATACAATAGTTACTTGCCGTGCACCAGGTAATAAAC
CGTACACAAAAGTATACGGCGATAGAAGTAAACGGGAAAACAGAAAATGTAATCGTCCAA
GCGTTTTTAACATATCTCCGGCGAAAATTGGAAGTTTTCCGGCCGAACAAGATTCTGATT
TTCTCAGTTCATGTCACTTGTGTCAAAAAAAGTTGCATGGCAAAGACATATATATGTATA
GGTATGTATATATGCCCACAACATTATTATTTTATATCGCGATCAAATTTATTATTTTTA
TGTAAATATAGTAGATGTTAAACATTCGTTCATAAATTTCAGGGGCGAGAAAGCATTTTG
TAGCACAGAGTGTCGGTACAGGCAAATAGTGATGGATGATCAGAAAGAAAAGTGTAGTTC
AAGATCTGTTGATGTTGCTACTTCACCTTATGGGAATGGACAAATCTTTTCCACTGGAAT
TCTCGCTGTTTAATCGATAAATTAATATTAGCATATATAGAACGTTCGTAAATACATCTA
TATATACTCGGGAATACTTATAAACATTATGAGAAAAAGTTCTGTAACCTTTCTTTTTTT
TTTTTGTATTTTCCCCCAATTTTGATTTGGATGTAGAAATGGAAAAGCTTAAATGTAGTA
ATTGAAAGTTTT
