Microarray Probes on PGSC0003DMT400065697
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23409_PI426222305 |
JHI_St_60k_v1 |
CTCATCTGCAGATAGAAACTGCGATAGAATTGAATTCGATGAATCTTTACAGGACTAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065697
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065697 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G48870.1 |
+3 |
5e-130 |
410 |
254/657 (39%) |
Transducin/WD40 repeat-like superfamily protein | chr1:18072325-18074457 REVERSE LENGTH=593 |
Transcript Sequence (3049 bp)
>PGSC0003DMT400065697 3049 pgsc_dm_v3.4
ATTTGAGCTAAATTTATACTTTTTATAATTCTTATGGGAAATGGTGTTCGTTTGTGTGGA
TTATGGGTTTGACTTCTGAGTTATCTAGTCTCTCGGAAATAGTCTCTCTATCTGCTTAAA
TTTTACTGGATATGTTGTTGTTATTGCCGCTTTTGAGTTATCTAAAATGTTTTTTTTTTC
CACAGTTTACAGCTGAAAGCTGATTCTTGAAACTCGCGTAGAAGGAAGCAAACAGCTATT
TATATTCTCTGCAAACGCCGCTCGTGGCCATTAAAGATTAGACGGCTATAATTGTGAGAT
TTGGTGTTTTGTGATTGGTGAAAAGAAAATTATATAAAGCATTTTCACCTTTCCTTGATC
CGCCATTTTCTCATTTGTGTGCATTGGTTTTAACCATTGGAGCAAACTTTACTTGGGTTC
TATACAGAGAACTTTGAAGAAGAAAACACTTGTTTTTGAGTTTGTTACTTATATTATATG
GTTTAGTAGTTGACCATTTTGAAAGGTGACATAGTATCCACAATCATCGGCAGGACGGTG
AAACTTGTTGGGATTATTCTGTTGGCTTGGAGGAACTTAAGGGAGTGAAACTCGGTCCTA
AAACTCAGGAATTGGCGTGTGGTATTTAAAGAGTTATGGGTGGTTGTTTATATATGTGGT
GAGAGGGTAACTGAGGATTTTGATGTGTAGTTGTGATGATGAAATCAATGCAAGTAGAAG
AAGTTTTCTTTGATTCAGCTGATTCTTTGGTGTTGGAGGAAGAGGAACTAGGTTTTGTGA
AAAAGAATTTGGGGTATGATGTATGGTTGATGGAGCCAGAAAGTGTGACGAGTCGAAGAG
AGAAGTTTTTGAATGAAATGGGATTTGTTGGATTTGACTGCCTACCTAGTGCAGCCAGTG
ATGAATCTGATTCAATGGGGTTGAACAGGATTGCGGAGAGTAGTGAAGCAGTTTGTAGTT
CTGCTTCGGAGGAAGAGTTTATGTGTAATGAAAGGGAATCTAGTGGTAATGCGAATTCAT
TGACTGATGAATTAGATCAGACTTGGTTTGATGATGATTGCACTTCTTCGCGTTCTACGG
ATGGAGAACATACTTGTTTTGATGCTACTTCCGACCACACACACCGTAAGGATAGTAACT
TGAAAAACCAGAAAATGAAGAAGTGGTGGAAACAATTTAGCCTAAAGATGAGTAAAAGTC
AATCTACTGATGCATTTAAGACTTCTAATGAGATGTTCACTGAAAAGCAGAAAGTAACTC
CAATGAAAGTGCAACTGAACAAGAAGAAAATTAATGAGTTTAGTGCGATTTATTGTGGAC
AAGAAGTCAGTGCTCATAATGGCCTTATATGGACAATGAAGTTTAGCCCTGATGGGAAAT
ATTTGGCTAGTGCTGGTGAAGATGGGGTTGTTCGGATTTGGCTAGTCACAGTTGATTCAT
CATGTGAATCACCTAACTTCAGTTTAAGCAGTCATCGCGTCAAAGGCAAGCATGGACATA
GAAAGAACAAGTCTTGTTATACCCCTGTTATTGTTCCTAAGAAGGCATTCAAAATCGATG
AGTCGCCGCTGCATGAATTTCATGGCCATACTGCTGGCATATTGGACCTTGCCTGGTCCT
CATCTAACTGTGTTCTATCTTCATCCAAAGATAAAACCGTTCGTCTATGGAAAGTTGGTT
TGGATGGATGCCAAGGAGTTTTTCATCACAAAAATTATGTGACATGCATCCAGTTCAATC
CTGTTGATGAGAACATCTTCATCAGTGGCTCCATAGATGGAAAAGTTCGTATTTGGGGAG
TTCCAGGAAAGCGAGTTCTGGAATGGACCGATACGCATGACATTGTGACTGCCGTAGCTT
ATCAGCCAAATGGCCAAGGATTTATAGTTGGTTGTATCTCTGGTACTTGCTGCTTCTATG
AATTGAACGAAAGCGTACTTTCCTTGAACACACAAGTACATCTTCATAGTAGGAAGAAAT
CCTCTGGCAGCAGAATCACCGGCATTCAGTTTTTCGAAAATGACTCCCAAAGAGTTATGA
TAACATCAGAGGATTCCAAAATCCATATTCTTGATGGGGTCGAGATTGTGCATAAATATA
AAGGTCTATCGAAATCAGGATGCCATACATCTGCTACAATTAGCTCAACTGGAAAACACA
TAGTATCAGTCGGGGAGGACTCACGTGTCTATCTCTGGGACAATGCTGATGATATAAACA
TCCAAGCATCCAAACAAACAAAATCTATACGATCCTGTGAGCATTTCCTCTCGGAAGGCA
TTTCTGTTGCAATACCGTGGTCAGGGCAGGCAACAACAGTAGTGGATTCAGAAAATTTTG
GCAGTTCCAACTTTGATCCACTAAGGGGTGAACATCAAAAGGCTTCTTGTAAGACTTTGG
ATTCAAGACGATTTTCTGTTGGAAATTGGTTTTCTATGGATGTGTCATTTAGGGGCTCCG
TGACATGGCCAGAAGAAATGCTTCTTCCACACGAAAATGATGAACACCTTTGTAGTTCTA
AGGTTGATCATCTTCATCAACAACATCAACATAACAAGAACCTTAACTACAGAGCGTTGT
CCCCGGCATGGGGCCTTGTCATTGTGACAGCTGGTTGGGATGGAAAGATTCGGACATTCC
ATAACTATGGATTGCCTGTCCGAGTTTAAGAGTGATTTTGTTGTCACGAATTCAAGCATT
TTTACACAACTCGGACATGTTTGAATGGATGGAATAGCACCCTCTTCTTCTAAAAATGTT
GCTACATCTGTGTCGGATCTTTGAGAAATGTAAAGTATTTGAAGGATCTGACACGGGTGT
GGCTGCACTTTCGGATGACTTAGGAGAGCTCATCTGCAGATAGAAACTGCGATAGAATTG
AATTCGATGAATCTTTACAGGACTAATTTTTGTTTCCTTGTGAAGTTGTAAATGTTCTTT
AAGCTAGTAAATGGTACTCAGATTAATTTTTTGACTGATCATATTGTAATTTGTAAATAT
TCAACAGTGTAAAGATAGAATATTTTTTTAATGAAAATGATTCAAAAAG
