Microarray Probes on PGSC0003DMT400065538
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50614_PI426222305 |
JHI_St_60k_v1 |
GAATAACCTTCATTTCAATTTTTCACACACACAAGGCTAGGTATGTTAGAAGGGGAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065538
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065538 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G42540.1 |
+3 |
0.0 |
538 |
263/514 (51%) |
glutamate receptor 3.3 | chr1:15973489-15976703 FORWARD LENGTH=933 |
Transcript Sequence (3467 bp)
>PGSC0003DMT400065538 3467 pgsc_dm_v3.4
ATTTTGACTCTTTCTTGGGTCATCCCTGATTTCTTCTTGTTTGGTGTTTTAAATGTTTAT
GAATTGTCATCATGGGTCTTCTGTAAAATTTGATGTGGGGCACACATTCCATTTTCTTGA
AAAAACTAAAAAGATGTTATTTTTAGAACCCCTTATTGAAAATCTTGGATTTTTTCACCT
TCAAATGTTGAGCTCTGACTTTTATATTTTGTGTTTTGGTGATTAGCAGAAGTTTCTGGA
AGAAATATTGGTGATATTAAATTGATGCTTTGAAGACTTAGAGGCGGAGCTAGAGTTCTA
GCTACGGGTTTGTGTAGGCAGTTTGTGTGATGGAGGCTTATTTACAAAGGAAGAGAGTGT
TTCTGTTGTTGGTTTCATGGATATGGCCTTTGGCTGTTCTTGGAGGGACTGGGAATAACA
CAACAAATGCAACTGCTCCTTTATCTTCCTTTTCTAGGCCTAAGGTGGTGAATGTTGGAG
CTTTGTTTACTTCTAATTCTGTTATTGGAAGGTCAGCTGAGCCAGCTCTTGTAGCTGCTA
TTAATGATGTTAACTCAGATTCTAGCATTCTCAGAGGAACCAAATTGAACCTCATATTTC
AGGACACAAATTGCAGTGGATTTGTTGGCACTGTTGATGCTTTGCAGCTAATGGAGAAAG
AAGTAATTGCTGCAATTGGTCCACAATCCTCGGGAATAGCACATGTGATTTCCCATGTTA
TGAATGAACTTCAGGTCCCTCTTCTGTCTTTTGCCACGGACCCTACTCTATCCTCTCTGC
AGTACTCGTATTTTCTTAGAACTGTTCCAAATGATCACTTCCAAATGTATGCTATAGCTG
ATGTGGTTAATTATTTTGGATGGAAAGAGGTCATAGCCATATTTGTTGATGATGATAATG
GTAGAAATGGGATATCTGTGTTGGGTGATGCCCTTGCAAAGAAGCGTGCTAAGCTCACTT
ACAAAGCAGCCTTTTCTCCTGGAGCAAGTAGTAGTGAGATTGCTGATTTGTTAGTCAGTG
TGAACCTTATGGAGGCACGAGTATTTGTTGTTCATGTAAATCCTGATACTGGGCTATCAA
TCTTTTCAAAGGCAAAGAATTTGGGAATGATGGTTGGTGGCTATGTTTGGATCACTACTG
ATTGGCTTCCATCGTTTTTGGATTCTTCTGATTCAGTTAATCCAGAAACTATGGATCTTA
TTCAGGGTGTTGTAGCACTTCGACATCACACCGCAGATTCTGATCAGAAAAAGAAGTTTG
CATCGCGATGGAAAAACTTTAAGAATGTGGAAACTTCAAGTTTTAATTCTTATGCACTCT
ATGCTTACGATACCATTTGGCTACTTGCCCGAGCTCTCGACCTTTACTTCAAGGATGGTG
GAAAGGTTACCTTCTCTGATGACCCCAGGCTACGTGATACAAATGGGAGTTCTTTGCATT
TGTCATCCATGCAAGTTTTTGACCAAGGACAGAAATTATTCCAGACACTCATTGGCATGA
ACTTCACAGGTCTAAGTGGCCAGATTCAGTTTGATTCTGAGAAAAATTTGGGTCATCCAG
CATATGATGTTCTTAACATTGGTGGAACAGGATCACGCACCGTAGGTTATTGGTCAAACT
ATTCTGGTCTATCAGTTGTAACTCCAGAGATTTTATACTCAAAACCTCCAAACACTTCAA
TCAGTACCCAACATCTATACAATGTCATATGGCCGGGAGAAACTGTAACTCAACCTCGAG
GATGGGTGTTCCCACATAATGGAAAGCCTCTGCAAATTGCTGTGCCTTACCGTGTTACTT
TTAAAGAGTTTGTGCATAAAGATAAAGGACCTTCTGGGGTAAAAGGATATTGCATTGATG
TTTTTGAGGCTGCCATAGATTTGTTGCCTTACGCCGTTCCTCATGTCTATATTCTGTATG
GAGATGGCAAGAGAAACCCCTCTTTCAAAAATTTGGTGAATGACGTCGTAACAAATGATA
CATTTTGCATCTTAGAAATATGATGCAGCTGTTGGAGATGTCACGATTACTACAAACCGC
ACAAGGATTGTGGACTTCACACAACCTTACATGGAATCTGGACTCGTCGTAGTTGCTCCT
ATCAAAGAGCTGAAATCCAGTCCATGGGCTTTCCTTCAGCCATTTACCCTCCAAATGTGG
TGCGTAACTGGGGTCTTCTTTCTCTTCGTTGGAACTGTCGTTTGGATTCTTGAGCATCGA
CATAATCCTGAATTCCGTGGTTCGCCAAGGCACCAACTTGTTACAGTTTTTTGGTTTAGT
TTCTCAACAATGTTTTTCGCACACAGAGAAAACACAATGAGCACCTTGGGACGCTTAGTG
CTGATCTTTTGGCTCTTTGTCGTTCTAATCATCAATTCGAGCTATACAGCTAGCTTGACA
TCTATCCTGACAGTGAGGCAGCTGTCATCAGGAATTCAAGGAATTGACAGTTTAATTTCT
AGTTCTGATCCAATTGGAGTTCAGGATGGCTCATTTGCCTATAACTACCTCATTGAAGAG
CTAGGTGTTTTAGAATCACGGATCCGTATATTGAAAACAGAAGATGAATATACCAGTGCC
CTGGAGAAAGGTCCGCAAGGTGGTGGCGTTGCTGGCATTGTGGACGAGCTTCCTTATGTT
GAGCTCTTCTTATCCAACAGCAAATGCGTATTCAGGACAGTAGGACAAGAGTTCACGAAA
GGCGGATGGGGCTTTGCATTTCAAAGGGACTCTCCTCTGGCTGTTGATCTATCAACTGCA
ATCCTTCAACTGTCAGAAAACGGCGAACTCCAAAGGATCCATGACAAATGGCTCTCTAAA
AACGGATGCTCTTCACAAAGCAACCAAGCTGATGATACTCAACTTTCACTCAAAAGCTTC
TGGGGCCTATTTCTCATATGTGCTGTTGCTTGTTTTCTTGCTCTTGTTGCATTTTTCTGC
AGGGTATACTGTCAATTCCGGAGGTATGACCCCGAGCCAGAAGACCAAGAGATCAGTGAA
CCTGAATCTGTACGTCCTAGTAGGCGTACACTACGGTCTGTGAGCTTTAGGGACTTAATA
ACCTTTGTTGACAGAAGAGAAAGTGAAATTAAGGATATACTCAAGAGGAAGAGTATTGAC
AGCAAGAAACATCAAGGTCAGAGCTCAGATGCGCAACCAAGCTCGCCTGTTTGAATCAAC
GATTCATTCGTTGGCTTGCTTGTTTCTTGCTCAGTGCAATGTGCCTATGGTTAATATGTA
AATGATGCATACGTAATTCCTCGTCGAATAACCTTCATTTCAATTTTTCACACACACAAG
GCTAGGTATGTTAGAAGGGGAAAAAAATGTCTTTGTATACTAGTAGGAGAGAAAAGAAAA
TGGTAACATTTGTACTAATTGTCATATAATGATAGTAATTGTTAAGATTTAGATCAGTTT
GCTTGCTTTTCCAGTAAGTTTGTCTGATGTTCAGCTACTACTATTAG
