Microarray Probes on PGSC0003DMT400065463
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30013_PI426222305 |
JHI_St_60k_v1 |
GAATATTTTGTACATAAAGAAGAAGATTTAGGGTTCTTAATTGCCAGGGGCTGCATATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065463
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065463 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G19810.1 |
+3 |
3e-108 |
328 |
202/365 (55%) |
CCCH-type zinc finger family protein | chr2:8550419-8551498 FORWARD LENGTH=359 |
Transcript Sequence (1331 bp)
>PGSC0003DMT400065463 1331 pgsc_dm_v3.4
GCTGCCTCCATCTTCTTCTTCTGAAGCCATGGTGAAGAAAAAGCAGTAGAGATAAACACT
AGTACTAAAAACCCTCCAAAAAAATGATGATGATCGGCCGATCAACTCCGACCGTCCAAA
TCCCTCCTTGGGACGTCACCGATGATCCAACGGTTGATGTTTACTCCCCATTTTCCGTTA
GCCCTGATTCTGCTTTCGATGCTTTGACGGCGTTGCAGCGTTACCTGCCGTCGAATGGTA
ACGACGTGATTTTTGACTCTGATGGGTTGGATATTCCGGTGGATGCTTTTTCATGTGATA
ACTTCCGGATGTATGAGTTTAAGGTGAGGAAGTGTGCCCGTGGAAGGTCACATGACTGGA
CGGAGTGTCCGTACGCTCATCCCGGTGAGAAAGCTCGCCGGAGGGATCCGAGGAAGTATC
ATTACTCAGGTACTTCTTGTCCTGATTTTCGTAAAGGTCAGTGTAAAAAAGGTGATGCAT
GTGAGTACGCTCACGGCGTATTTGAGTGTTGGCTACACCCTGCACGCTATCGTACGCAGC
CTTGTAAAGATGGGACCCACTGCCGCCGGCGCGTGTGCTTCTTCGCTCACACGCCGGAGC
AACTCCGTGTTTTGCCTCAGAACAGTCCGAGAAGCTTCAACGAGTCGTCTGATTCGTTTG
ATGGGTCTCCGGGTCGGGTCGGGTTTGAATCGTTTTCGTCGTCTCCGCCGCTTGAATCTC
CTCCGATGACTCCGCGTGGGCTGGCGGAATCGATGCGTAATATGCAGATTGGGATGGTGA
GAGGTATGCGTAGTATGCAAATGGGTTCACCTGGGTTTGGTTCACCTCGGAGCCCTTCAA
TACTCCGACCCGGATTCATGAGTGTGCCAACAACTCCGACCCGGAGTGGAGTGTCGGTGT
TCGATCACTGCGAAGAAGAGCCGGCGATGGAGAGGGTAGAATCCGGGAGAGATCTCCGAG
CAAGAATTTATGCTAAACTAAGCATGGAGAACTCTCTTGATGATTCCGGTGCACCGGATG
TTGGATGGGTTTCCGAACTGCTGAATGGAATCCGGGTTCGGGTTATTGGTAATGGGTTTA
CGGATCTGAGGCCTCTGACTTTTGTAAATATTGAAGATTATTGTTATTGGTTGTAAATAG
TTAGTAGTTTGGGCTGGAGAGATTAGCCTATTAATCTCTATTTTGTGTTTGCTTATTTGG
GTATTAGGGGGAAGTTTTGAATATTTTGTACATAAAGAAGAAGATTTAGGGTTCTTAATT
GCCAGGGGCTGCATATGTATATATGATTATCAAATTTGTATTTCATTTCTTGCCATTTTT
GCTAATGTTTC
