Microarray Probes on PGSC0003DMT400065313
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48942_PI426222305 |
JHI_St_60k_v1 |
TTAATTCCCAACTATGAGGAAAGAGTATCCGGGAAGAGAATAGACGTAGGTACCTCCCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065313
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065313 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28550.3 |
+2 |
1e-110 |
343 |
238/450 (53%) |
related to AP2.7 | chr2:12226168-12228251 REVERSE LENGTH=464 |
Transcript Sequence (1798 bp)
>PGSC0003DMT400065313 1798 pgsc_dm_v3.4
AATTTGTGTTCTCGACTTTTCATGATTCAATTTTTCTTCGTAATTGTTTGAAACATATAT
AATATAAGTTAGAAAAAACAAAAAAGTTAAATTAAAAAAAGTGAGAATTTTGAATTTGTT
AAAAGGAATGATGTTGGATCTCAATCTAAGTGCAATTTATGATGGGAAACATTCGTTAGC
CGATGAATCGGGAAGCTCCAATTCATCGGCTAGGAATGTAGAGGCTAGTAGTAGTGCCGG
AGATGACGAGACGTGCTCCACACGCGCCGCTGCCGGCAGCGGCGATATGTTCGCTTTCAA
TTTCGACATACTTAAAGTTGGTGGTGGTGGTGGAGGTGAAAATAGCCGGAGCTGTAGTAA
CAATGATGATGAAGAGGGATATGTAATAACAAGGTCCGAGTTCGTGACTCAGCAGTTGTT
CCCAGTGGACAACAATGCTGAGTTGAATCGAACCCACACCTCTCGAACAACTGATTGGGT
GGATCCGTCTGTGGATCCACCCAATACTGTTAGTTTTCGAGAGGTGGAGCAAATGGGACG
TCTACAACAGCAACAGCAGCAGCAACAACAGCCAGTTAAAAAAAGTAGGAGGGGACCTAG
GTCCAGAAGCTCACAGTACAGAGGTGTTACTTTTTATAGAAGAACTGGTAGATGGGAATC
ACATATATGGGACTGTGGAAAACAAGTATATTTGGGTGGATTTGACACTGCTCATGCAGC
TGCTAGAGCGTATGATAGAGCTGCAATTAAGTTTCGGGGTGTTGATGCTGATATAAACTT
TAACCTTAGTGATTATGAGGAAGATATGAAGCAGATGAAGAACTTGAGTAAGGAAGAATT
CGTGCATGTGCTGCGACGCCAGAGTACTGGTTTTTCGAGAGGGAGCTCGAAATATCGAGG
AGTAACGTTGCATAAATGTGGGAGATGGGAGGCTCGGATGGGGCAATTCCTTGGAAAAAA
GTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCGTATGATAAGGC
CGCGATCAAATGTAATGGAAGGGAGGCTGTTACCAATTTCGAGCCAAGTACATATGAAGG
GGAAACAAACTCTAACCCTCAGAGTGAAGGTAGCCAACAGGATCTTGATCTAAACTTGGG
GATCGCGACTTCTTCTCCGAAGGAAATTGAAAGGTCTTCGAGTTTCCAATATCATCCTTA
TGATATGCAAGAAGCAACGAAATCACAGATGGACAAATCTGGTTCACCGATAGTTGGTAG
TTCACATTACAAGGCATTACCTGCAGTGACATCTGAACAAGCTCACTTGTGGAATGGAGT
ATTTTCCAATTTAATTCCCAACTATGAGGAAAGAGTATCCGGGAAGAGAATAGACGTAGG
TACCTCCCACGGACACCCAAACTGGGCAATGCAAATGCATAGTCAGGTCGGAACAACGCC
AATGTCAATGTTCTCTGCTGCAGCATCATCAGGATTCTCAACTCCGGCTACCACTGCTTC
GGCCTCTCAAATGTCTGGTCCCAACAACGCAAACACTCTCAATCTTTCCTTTGCTTCATA
TTCGACACCATCAATGAATACAACTCCATACTATTACCAGATCAGGCCACAATTACCACC
TCCATAACATGTATTTTCCCTAGCATTACTATTAATACATTTTACATATAACTCAAAACT
GATTCCATTTGTAAGAATTGTTTGTTATCAATTCATTTACATGTTGATTTTAAGTCACAA
CTTGTACGAATTGGAATGTGAAGATTCAAATTTCCATCATATTTTGTGCTTTTCCTTG
