Microarray Probes on PGSC0003DMT400065312
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48928_PI426222305 |
JHI_St_60k_v1 |
TTAATTCCCAACTATGAGGAAAGAGTATCCGGGAAGAGAATAGACGTAGGTACCTCCCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400065312
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400065312 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28550.3 |
+2 |
8e-96 |
304 |
223/450 (50%) |
related to AP2.7 | chr2:12226168-12228251 REVERSE LENGTH=464 |
Transcript Sequence (1753 bp)
>PGSC0003DMT400065312 1753 pgsc_dm_v3.4
AATTTGTGTTCTCGACTTTTCATGATTCAATTTTTCTTCGTAATTGTTTGAAACATATAT
AATATAAGTTAGAAAAAACAAAAAAGTTAAATTAAAAAAAGTGAGAATTTTGAATTTGTT
AAAAGGAATGATGTTGGATCTCAATCTAAGTGCAATTTATGATGGGAAACATTCGTTAGC
CGATGAATCGGGAAGCTCCAATTCATCGGCTAGGAATGTAGAGGCTAGTAGTAGTGCCGG
AGATGACGAGACGTGCTCCACACGCGCCGCTGCCGGCAGCGGCGATATGTTCGCTTTCAA
TTTCGACATACTTAAAGTTGGTGGTGGTGGTGGAGGTGAAAATAGCCGGAGCTGTAGTAA
CAATGATGATGAAGAGGGATATGTAATAACAAGGTCCGAGTTCGTGACTCAGCAGTTGTT
CCCAGTGGACAACAATGCTGAGTTGAATCGAACCCACACCTCTCGAACAACTGATTGGGT
GGATCCGTCTGTGGATCCACCCAATACTGTTAGTTTTCGAGAGGTGGAGCAAATGGGACG
TCTACAACAGCAACAGCAGCAGCAACAACAGCCAGTTAAAAAAAGTAGGAGGGGACCTAG
GTCCAGAAGCTCACAGTACAGAGGTGTTACTTTTTATAGAAGAACTGGTAGATGGGAATC
ACATATATGGGACTGTGGAAAACAAGTATATTTGGGTGGATTTGACACTGCTCATGCAGC
TGCTAGAGCGTATGATAGAGCTGCAATTAAGTTTCGGGGTGTTGATGCTGATATAAACTT
TAACCTTAGTGATTATGAGGAAGATATGAAGCAGATGAAGAACTTGAGTAAGGAAGAATT
CGTGCATGTGCTGCGACGCCAGAGTACTGGTTTTTCGAGAGGGAGCTCGAAATATCGAGG
AGTAACGTTGCATAAATGTGGGAGATGGGAGGCTCGGATGGGGCAATTCCTTGGAAAAAA
GGCGTATGATAAGGCCGCGATCAAATGTAATGGAAGGGAGGCTGTTACCAATTTCGAGCC
AAGTACATATGAAGGGGAAACAAACTCTAACCCTCAGAGTGAAGGTAGCCAACAGGATCT
TGATCTAAACTTGGGGATCGCGACTTCTTCTCCGAAGGAAATTGAAAGGTCTTCGAGTTT
CCAATATCATCCTTATGATATGCAAGAAGCAACGAAATCACAGATGGACAAATCTGGTTC
ACCGATAGTTGGTAGTTCACATTACAAGGCATTACCTGCAGTGACATCTGAACAAGCTCA
CTTGTGGAATGGAGTATTTTCCAATTTAATTCCCAACTATGAGGAAAGAGTATCCGGGAA
GAGAATAGACGTAGGTACCTCCCACGGACACCCAAACTGGGCAATGCAAATGCATAGTCA
GGTCGGAACAACGCCAATGTCAATGTTCTCTGCTGCAGCATCATCAGGATTCTCAACTCC
GGCTACCACTGCTTCGGCCTCTCAAATGTCTGGTCCCAACAACGCAAACACTCTCAATCT
TTCCTTTGCTTCATATTCGACACCATCAATGAATACAACTCCATACTATTACCAGATCAG
GCCACAATTACCACCTCCATAACATGTATTTTCCCTAGCATTACTATTAATACATTTTAC
ATATAACTCAAAACTGATTCCATTTGTAAGAATTGTTTGTTATCAATTCATTTACATGTT
GATTTTAAGTCACAACTTGTACGAATTGGAATGTGAAGATTCAAATTTCCATCATATTTT
GTGCTTTTCCTTG
