Microarray Probes on PGSC0003DMT400064581
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19397_PI426222305 |
JHI_St_60k_v1 |
GAGACGCCACAATCACTGTAAATCCTTCTGCTTTGATTCCCATTTCTGATATTTCACCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064581
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064581 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G26210.1 |
+2 |
1e-12 |
65 |
42/87 (48%) |
SOB five-like 1 | chr1:9067524-9067970 FORWARD LENGTH=148 |
Transcript Sequence (887 bp)
>PGSC0003DMT400064581 887 pgsc_dm_v3.4
GAACATTGGGACTTACTTAGCTATTTCTGGTGTGGGGCACTCTTCTTTGTACTGCTATTT
CAGAACTTGCTTCTCTATTTATGAGATAGACACTGTGAGTAAATATGATGATATATCAGG
TGTGACAGATAAGTATAACAAGTGAACATGCATGGAGGATATGAGTAAAGGTTAGTCTTT
TTTGTTCTTTTTTTCTTTGAATGGTTTTCAGTTTTCAGTGAGGGTAATGGAGTATCCTAA
ACATCCTGGAGGAACAGAAGAATGCAACAGCAATGAGTCTGGTTGGACGATGTATATCGG
TTCACCTTACTGTGAGTATAATCAAATAGATGATGATGATGATGAAGGAACTCCAATGAA
GGGTGATGATCATGTTGAAGATGGTGGTAGCGATGATTCCATGACTTCGGATGCTTCATC
TGGTCCAAGTCATCAAGGAGTAGTACTATGCACAAACATGGAGCAAATTTATGGAAAGCA
TGTGGAAAAAGATATCAGGAAGTTCTCAAGCAAGGAACAACTACAGCAACAAAAACAGGC
AAAGAAGAAATTGTCTGATAAGAATACAAAAGCAGCAAAAGAAGATTCAGGACATAAAGC
AAAGAGTGGCAAAGGTTATGGTTATTGCAGATCAACAACAAGGGGAAAACATGTGAGTTA
AGAGCCAAAACCGAGACGCCACAATCACTGTAAATCCTTCTGCTTTGATTCCCATTTCTG
ATATTTCACCTTTGTTATTAGAGATCCTGTATAAGATTAGGCAAACCTATTCAGCACATG
AACAACAAATGTAATACATTATATATCCTATAATGTCAAGATTTAAGAGTCTGTCATTCC
TGATGTAAATTTTCACATATCTTCAAATGTCAAGTTTTCATCTCTTT
