Microarray Probes on PGSC0003DMT400064432
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43280_PI426222305 |
JHI_St_60k_v1 |
CGATGTCCGGCATCTGTATTGGCATTCTCATGAATTAATTAGTTGAAATATATATCTGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064432
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064432 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27470.1 |
+3 |
2e-40 |
147 |
77/195 (39%) |
RING membrane-anchor 3 | chr4:13735576-13736307 FORWARD LENGTH=243 |
Transcript Sequence (1381 bp)
>PGSC0003DMT400064432 1381 pgsc_dm_v3.4
GAAAAAAATTCACGCCCATTTCATTGCTTCTCCATTTTTCTCCTTTCAATTTCTCCTCCA
ATCACTTCCAACGACGCCGTTTATCTTCGAGACTCGCCGTCGATCATCTCCTCCGATCAT
ACTCTTCCGTTCTCCAACGCGCCGATTCCATGGCTCTAGAACAGTCTTTTGGTGAACCTA
TTATCGGTTTTGGATCTGATGAAGACATTTCCCTAAAGAAAAGGAACTCAGTTCCAGTTC
CAATGGCAAACTCTGGAAAGCTGATGGGATGTTTTGATTGCAACATTTGTCTTGATTCTG
CACACGATCCTGTTGTCACTCTCTGCGGTCACTTATACTGCTGGCCTTGCATTTACAAGT
GGCTTCAAGTGGAGAACTCTGCCCCAGGATCAGAAGAGACACCTACATGTCCGGTCTGCA
AATCTCACATCTCAAACTCCTCATTGGTACCTCTCTATGGCCGCGGTACATCATCAGAAG
AACGCAGATCCAATGAGTCTCAAGTTGATGTGGTCGTACCTCACAGGCCTCAAGCCATTT
GGACAACAGCCACTCAAGTTAACACATCATCACCTCCGACTTCTCATGTTCATCCACAAC
TTAATCACACTTCTTTGTATTATCCACCACCCTCAATTCATCACCAACAATTCTTCCCCC
ACGCTTTTGGTGGCTATGCAGCTATAGCTCCATCTACCTTCGGAGGCTCTGGAATGACTC
GATTAGTCAGCCCAATGGTCGTGATGTTTAGTGAAATGTTTCTTGCGAGGATGTTGGGGG
GCTCGGATGCAAGCTCGTTCTCCTATCCTTATCTTAGCTCTTACCCCATCCCAGGAGGCG
GTAGCTCTAGAATGAGAAGGCAAGAAATGCAAATGGACAAATCTCTCAACAGATTATCCA
TCTTTCTCTTCTGCGCCTTCATCTTGTGCCTTCTCCTATTCTGATCACTATTATTACTAT
ATGCTTCTTCATCATTGTACAGATGTAAAAAAAATATCTGACTGTACCCGATACCTATGG
ACGATCTATTGAAACGCATAGGTGGCATCAGTCTGGCGTTAACAACAATAACAACATATC
CAGTGTAATCTCACGAGTGGGATCTGGGAAAGGTCAAGTGTATGTAGACCTTACCCGTAC
CTCGTGGAGATTGGACATGTAGTTGATAGTTAAAGAAAAGAATAACATGACTTATAGTGA
TTAAGCATAAAAGACTCTATTTCTTGCAAAGGTTGCTTTAATCTTCACTTTGTGTGAAGT
GCTCCTCTTCTTCCCACTCGATGTCCGGCATCTGTATTGGCATTCTCATGAATTAATTAG
TTGAAATATATATCTGAGATCTAGCTTGAGCAATATCATTCAATAAAATATTTAAATCTT
A
