Microarray Probes on PGSC0003DMT400064406
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43321_PI426222305 |
JHI_St_60k_v1 |
GGAGTTGTCTTTATTATGCAAAATCTTGTTTCTATACGATCGATCATTCGACTACAAGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064406
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064406 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54470.1 |
+3 |
8e-29 |
112 |
51/76 (67%) |
B-box type zinc finger family protein | chr5:22114584-22115315 REVERSE LENGTH=215 |
Transcript Sequence (983 bp)
>PGSC0003DMT400064406 983 pgsc_dm_v3.4
TTTCTCTCTTTTCAACTCACCATTCAAAAAACTCCAATCCCCATTCTAACATTCCTTCAA
AAACCCCAAAATAATTCAAATCACAAAATTTTGTTCAATTTTTCATTGATATGAACAAGA
TGAATTGTGAGTTATGTGATAAGAACAAATCAATGATGTATTGTGAATCAGATCAAGCAA
GGCTTTGTTGGGATTGCGATTCGAAAGTTCATTCTGCTAATTTTCTCGTAGCTAAACACT
CGAGAAATCTCCTTTGTCATTCATGTCAAAATTCAACTCCATGGACTGCTTCTGGTCCAA
AGCTTTCTCCTACCTTCTCTGTCTGCAATTCCTGCCTCGAAAACCCTAACACCGCCGCCG
TTCGATTACAAGATCCAATTGAAGAAATTGGGGAAAGAATTGAAGAAAATTATCAAACGG
AAACTGATAATGACGAAGATGAGGATGAATACGGGAGTACTGACAGTGAAATTGATGACG
ACGATGAAGATGAAGATGAAGAGGATGGGAATCAAGTTGTTCCTTTATCTTCTTCTCCGT
TGAGTAATTTCTCTCCACCGTCGCCGGTGCGTTCGGTGAGTTCTTCCGGCAGTTATGGAG
ATTTATCAGCTGCCGGAGATTCTGGTGGCGGCGGCGGCGCTACGGTGGCTGTTAATTCAT
CTCCGTGGAAGCGAGTAAGGGAAAGTGATTGCCTACATTTTGAGGATGAAGAGGCATATT
CGTCGAGTTTGTTGTTGGAAGAGAACAAGGGAACAACTTCATCCATAGGGTTCTTGAGAC
CAATGAAGGTGCTTCGAACAAATGAGTTGTGTGATTAGTCACAACTACGTATTTAGTGTA
ATTTCAGAAGTGAAGTTTGGAATGAGTACGTAGGAGTTGTCTTTATTATGCAAAATCTTG
TTTCTATACGATCGATCATTCGACTACAAGAGACATACACAAATAGAATTATACATTTTC
CTTTTCATGCTTCTTATTTTTTC
