Microarray Probes on PGSC0003DMT400064388
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43278_PI426222305 |
JHI_St_60k_v1 |
TGACAAGCTCATGGATTACTGTGTTAGCTTAGGTGCTTCCCTTGACCAATACAAGACACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064388
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064388 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54510.1 |
+1 |
0.0 |
840 |
401/538 (75%) |
Auxin-responsive GH3 family protein | chr5:22131321-22133564 REVERSE LENGTH=612 |
Transcript Sequence (1623 bp)
>PGSC0003DMT400064388 1623 pgsc_dm_v3.4
ATGCCTGTCATCACCTACAAAGATATTCAGCATGATATTAACCGTATAGCCAATGGTGAT
AAATCTCCGATCTTCTGCTCCCAACCCATCTCTGAATTCTTGACAAGTTCTGGGACGTCC
GGAGGGGAGAGAAAATTGATGCCAACAATTCCAGAAGAGATTGGGAAGAGATTTCAGCTT
CGCGGCCTTGGGATGTCTGTGATAAGCCAATTTGTTCCAGATTTGGAAAAGGGCAAAGGA
ATGTATTTCTGGTCCATAAAGTCCGAAGCCAAGACCCCAGGAGGATTAACAGCTCGCCCT
GTTTTAACAAGTATGTGCAAGAGTCCTTATTTCAACAACAACCGTTTTAGCCCCTATGCA
AACTACACTAGTCCAGCTGAAACCACTCTCTGCCCAGACTCTTACCAAAACATGTACTCC
CAAATGCTTTGTGGTCTCTACCAATGCAAAGAAGTCATCAGCGTTGGCTCACCCTTTGCA
TCCAGCTTCATCCGTGCCATCCGGTTCCTAGAAAAGCACTGGTCTCTACTTTGTAACGAT
ATTCGAATGGGAACCCTTAACACCCAAATTACAGATCAGTCAGTGAGAGAGTCGGTGATG
AAAATCCTCAAACCTGACCCAGAGTTAGCTGATTTCATCGAGGCTGAATGCAGTAGAGAT
TCATGGCAAGGGATCATCGCTAGGTTGTGGCCAAACACAAAGTATGTGGCTGTTGTTGTA
ACCGGAAGCATGTCACAGTATATACCTACCCTTGATTATTACAGCAATGGCCTCCCTCTT
GTCTCTACCATGTATGGTTCCTCAGAATGCTACTTTGGAATCAACTTGAACCCCTTTTGT
AAGCCCAGTGAAGTCTCTTACACCCTTATTCCCACCATGTGCTATTTTGAGTTCGCACCA
ATTCACAGAGACAATGGAGTCATTAATTCTATCTCCAAGTCTAAGCTGCTTAATGAGAAA
GAACAAAATCAATTAGTTGATTTGATTGATGTCCAGATTGGCCAGGAGTACGAGCTTGTT
GTTACCACATATTCAGGACTCTATAGATACAGAGTGGGTGATGTGCTTCGAGTTGCTGGA
TACAAGAACAATGCACCTCAATTCTACTTCGTATGTCGGGAAAATGTAATCTTGAGCATT
GATTCCGACAAGACTGATGAAGCTGAGCTACAAAATGCAGTAAAAACTGCAGGGCACAAT
CTGATACCATTTGATACAAATGTAACCGAGTACACCAGCTATGCCGATAGCGCCACCATT
CCAGGCCACTATGTCCTATTCTGGGAGCTCAATGTGAATGGCTCTACCCAAATTCCTCCT
TCTGTCTTTGAAGATTGTTGCCTCACCATTGAAGAATCTCTAAATAGCGTCTACCGCCAG
GGGCGTGCCTCTGACAAATCCATTGGGCCTCTGGAAATCAGGATAGTGGAAATTGGGACT
TTTGACAAGCTCATGGATTACTGTGTTAGCTTAGGTGCTTCCCTTGACCAATACAAGACA
CCCCGATGTGTGAAATTTGCACCCCTTGTTGAGCTATTGAATTCGAGAGTCATGTCCAGA
CACTTCAGTCCCACGTGTCCAAACTGGGTTCCTGGTAACAAGCAATGGAACAACATGAAT
TGA
