Microarray Probes on PGSC0003DMT400063585
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12514_PI426222305 |
JHI_St_60k_v1 |
GAGCCCTATGCTAGCTTCCTCACATATCTTTTGTAATCGATGTGTTGAATAACAAAATAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063585
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063585 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G05550.1 |
+2 |
4e-28 |
105 |
67/93 (72%) |
Hypoxia-responsive family protein | chr3:1612860-1613748 FORWARD LENGTH=97 |
Transcript Sequence (736 bp)
>PGSC0003DMT400063585 736 pgsc_dm_v3.4
TGTTTTCTTCTCATATTTCTCTTACCAAAAAATAAAATAAAATTAGATTCTCCATCTTTG
TTCTGTTCTAAAGATGGAGGCATCTAATAAAAAAACTACATTTGAATCTGCTAGGGAATG
GATTTCTGACCACAAGCTTCGCACCGTCGGATCTCTGTGGTTAAGTGGAATAGTGGGATC
GGTGGCTTACAATTGGTCAAAACCCAGCATGAAAACCAGTGTCAGGCTCATCCATGCTAG
ATTGCACGCACAAGCACTTACTCTCGCCGCATTAGCCGGTGCTGCAGCAGTTGAGTATTA
TGATCATAAAACCAACAACAATGCCCAACGATACCCCAAATTCATCAACATGAATTCGTT
TGCACAGAAGAAATGAAGCAAGGAATATTGATGAAATTTGTAAATTTTTGTGGGGTTACT
TTTTGTGTCAAAATTATTTGTGGTAACACGAGCCCTATGCTAGCTTCCTCACATATCTTT
TGTAATCGATGTGTTGAATAACAAAATACCAAAACATAGAGATTTTTTCCTATCAACTAG
CAGTTTTTGTTTCTTTTTCATTTATCTTTCCGATTCTTTGAATGAATGGACAGAATTATT
GCTGGTTGGAATAAAAAATTGTAAATGTAGTTTCCTTTTGATTCATTTGTAATTTGGCTG
TTAAAGAAAGTTAGAAAATACTTGATACAAGTATAGGAAAGCAAAAGAGCAATATGAGGA
ACCTTGAGTTGACCAA
