Microarray Probes on PGSC0003DMT400062931
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12733_PI426222305 |
JHI_St_60k_v1 |
AGATTAGTGGCAAGAGCTATCTCTTGTGTCAAGAGGTTCAATCCAGAAAAATTATATGGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062931
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062931 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G60190.1 |
+1 |
5e-162 |
490 |
272/692 (39%) |
ARM repeat superfamily protein | chr1:22198403-22200463 FORWARD LENGTH=686 |
Transcript Sequence (2415 bp)
>PGSC0003DMT400062931 2415 pgsc_dm_v3.4
AATTTGTTAACTTTCTCAAATGAAAAAAAACAGAGCTCATTAACACATCAAATTCAAACA
TTAAACTATAGTTTTTTTCGATCGATGATTCAAAGATTTGATCGGAATGATCGCCGGATT
TTGACATTCCCGGCGGTACATCCATGTGAGGGGATATCTCCGGCTACCCTTTTAGATTCT
TTGATTACTCTATCTCAGGGCATATGCACTTTCAAATCGAAATTCTTTCCATCTCAACGG
AGAAATGTTCGCGAAATGATTAGGCAAGTGGGGATCCTCTTGATTTTTTTCGAGGAAATC
CGGGATCATCTACCTAGTGATAGAGATTCCATTGTTCTTTGTTTTGCAGAACTACACACA
ACGTTTCAAAAGATTAAGTTTTTATTAGATGATTGTATGCGTGAGGGGGCGAAAACTTGG
ATGCTTATGAAATCCCACTCTGTAGCGAGTCAATTTCAAGTTTTGGTTAGAACTGTGGCT
ACTGCACTTGATGTTCTTCCTTTGAATTCTCTTAATGTTTCCAGAGAAATCAAGGAGTTG
GTTCTAATGGTGGCTAATCAAGCACAGAGGGCGAAAATGGAGCTCGACCCGGAAGACGAA
GAAGCTGTGAAGAGAATAATTTTGCTTTTGAACCAATTTGAGAATAAGTTTCAGCCTGAC
CCCCGTGTAATCAAGAAATTTCTGGATTATCTTGATATCACAACCTGGGCAGAATGTCAC
AAGGAGATTAAATTCTTAGAGGATGAGATTAATTTCGAATGCTCGGAGAATTACGAACGA
GAAGTACCTATGCTAAGCAGTTTAGTTGGATTCTTGAGCTATTGCAGGGGAATTTTGTTT
GAGGACTCTGTTTATGGGAACACTGATCAATCAGATGGAACATCCAACCTGGAAACTCTG
AGTTGCTTGAATCCTGAGGATTTCAGGTGTCCCATTTCTCTGGAACTCATGACGGATCCA
GTGACAGTGTCCACGGGCCAGACTTATGATCGCGCTTCGATTCATAAATGGCTCAAGTCA
GGGAACCTCCTCTGTCCCAAAACAGGGGAGACATTACAGAGCACAGAATTAGTACCTAAT
TCCTCTCTGCGGAACCTCATCCAACAATTCTGTGCTGATAATGGAATATCACTAGCTAAA
TCAAGGAAGAAGAATCGTGATATATCGCGGACTATTTTGCCAGGAAATCCAGCAGCGGCG
GAAGCAATCAAATTCCTCTCCGAATTTCTCGCGTGCAGGCTGTATTTTGGTTCTGATCAG
CAGAAAACCAAGGCTGCTTATGAAATTCGCTTGCTTGCAAAATCAAATATATTCAACCGG
TCCGTGTTAATCGAAGCTGCAACAATCACAGCACTCTTACAAATGCTTAGTTCAAATGAT
CCATCTATGCAAGAGCATTCAATTTCCGCCTTGCTCAAACTATCGAAACATTCCAACGGA
AAGAAAGTGATCATGGAAAATAGGGGCCTGAATTCGATTCTTGGAGTTCTCAAGAATGGC
CTAAAGCTAGAATCAAAGCAAATTGCAGCAGCGATAATTTTCTACATCTCTTCACCTCGT
GAATACCGCAAGCTAGTAGGCGAAAATCCAGAAGTATTTCCAGCTTTAGTGGACTTAATC
AAACACGGAACAAGTTGCGGGAAAAAGAACGCGATTGTTGCAATATTCGGGCTGCTGTTG
AGTCACAGGAACCACGAGAGAGCACTTGCAGCTGGAACAGTTCTAGCACTAGTCAATCTT
TTATCTTCTTCAGATAAAGTTGAACTAAACACAGACGCACTCGCGGTTCTAGCTACATTA
GCCGAAAGAACAGAAGGGTCTTTCGTGATTTTAGAAGCTTCAGCATTACCAGTAATCTTG
AATCAATTACAGAACACAACATCTCGAGCGGGAAAAGAGTATTGTGTTTCCATTTTGTTG
TCATTATGTGTCAATAGTGGTGCGGAGGTATTAGCCGCTCTGGTAAGAGAAAAGGCGCTT
ATGCCACTTCTTTATTCACTTTTAACAGAAGGAACCAGCCAAGCAAAGAAGAGGACACGG
TCTCTTATCAAAATTCTACAGAGATTTTGTGAAACGAGCACTTCTAGGCTTGTGAGTGAA
GTTCCACAAGAACAATTTATTGATGTAAGGTGAAAAAGGTCGAAAGATTTAATTTTAGAA
TCCTCAAATTCTGCATGTAAATATATATAGAGTCCTGAATGGTAGTTACTTGTGTTATGT
TTAGTTCCTCACTCTTTTTTTTTGAGGGGCTATATCATTGTAGGTCATTGGATTTGGGAA
CTTATACTTTGAATAAATTTGTATACAATTCTTTGTTGTGTGAGATTTTGATCTTGTATG
ATAACCAAATAGGCAAGATTAGTGGCAAGAGCTATCTCTTGTGTCAAGAGGTTCAATCCA
GAAAAATTATATGGC
