Microarray Probes on PGSC0003DMT400062613
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39791_PI426222305 |
JHI_St_60k_v1 |
GGTGTTTGGGAGTCTAAAAAATTGAGACATCTTTGTTACACAAAAGAATGTTACTGTGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062613
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062613 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G58410.1 |
+1 |
7e-27 |
111 |
82/286 (29%) |
Disease resistance protein (CC-NBS-LRR class) family | chr1:21701286-21704255 REVERSE LENGTH=899 |
Transcript Sequence (879 bp)
>PGSC0003DMT400062613 879 pgsc_dm_v3.4
ATGTTAAGGGCAAGAGAAAGAACAGAACGTGCATGGAACAGGTTACTTGAGAGTATGAGC
CATAAAGTTCAAGATGGATGTGCTAAGGTATTGGCTCTGAGTTACAATGATTTGCCCATT
GCATTAAGGCCATGTTTCTTGTACTTTGGTCTTTTCCCCGAGGACCATGAAATTCGTGCT
TTTGATTTGACAAATATGTGGATTGCTGAGAAGTTGATAGTTGTAAATAGTGGCAATATG
CGAGAAGCTGAAAATTTGGCGGAGGATTTCCTAAATGATTTGGTTTCAAGAAACTTGATT
CAAGTTGCCAAAAGGACATATGATGGAAGAATTTCAAGTTGTCGCATACATGACTTGTTA
CATAGTTTGTGTGTGGATTTGGCTAAGGAAAGTAACTTCTTTCACACCGAGCACAATGCA
TTTGGTGATCCCAGCAATGTTGCTAGGGTGCGAAGGATTACATTCTACTCTGATAATAAT
GCCATGAATGAGTTCTTCCGTTCAAATCCTAAACCTACGAAGCTTCGTGCACTTTTCTGT
TTCAACAATAACAGTTGCCTATTTTCTCATATGGCTCACCTTAGTTTCAAATTATTGCAA
GTGTTGGTTGTAGTCACGTCTCGAGATCGTTATCAGCATGTAATTACTATCCCAAACAAA
ATTGGGAACATGAGTTGCCTACGCTATGTGCGATTGGAGGGGAGAATTAGAGTAAAATTG
CCAAATAGTATTGTCAAGCTCAAATGTCTAGAGACCCTGGATATATTTCATAGCTATAGT
AAACTTCCTTTTGGTGTTTGGGAGTCTAAAAAATTGAGACATCTTTGTTACACAAAAGAA
TGTTACTGTGTCTTTATTTATATTGTATTGTTTGACTAA
