Microarray Probes on PGSC0003DMT400062607
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39716_PI426222305 |
JHI_St_60k_v1 |
CTTGTTTCTAATCAAGTTCTTGGTCCTGAATTGGCTTTCTCACCTCCAGTCCTCATACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062607
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062607 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G13840.1 |
+1 |
4e-102 |
317 |
179/427 (42%) |
HXXXD-type acyl-transferase family protein | chr4:8014088-8016326 REVERSE LENGTH=428 |
Transcript Sequence (1520 bp)
>PGSC0003DMT400062607 1520 pgsc_dm_v3.4
CTACAAGCTCCTCTACTCCCACTTAGAAAAATAATAATTCCAAAAATGGTGTCTTCAAAA
TTAGAAGATGGTCTAATTTACAACATAAAATTATCCTCAGTTGGACCAGCTAGAGTAACA
GGACAAGATGTTGTTTATGAGCCAAGTAACATGGATTTGGCCATGAAATTACATTATTTG
AGAGGGATTTATTACTTTGATAGCCAAACATTTCAAGATGTCACAATTTATAAAATAAAA
GAACCAATATTTATTTGGTTTAATTATTTTTATATGACTAATGGTAGGTTTAGAAGGGCA
GAATCAGGGAGACCTTATATTAAATGTAATGATTGTGGTGCTAGGTTTATTGAAGCACAA
TGTGATAAAACTTTGGAAGAATGGCTAGAAATGAAAGATGCTTCACTTGAGAAATTACTT
GTTTCTAATCAAGTTCTTGGTCCTGAATTGGCTTTCTCACCTCCAGTCCTCATACAGCAT
ACCAAATTCAAATGTGGTGGAATTTCATTGGGCCTAAGTTGGGCCCATGTACTTGGAGAT
GTATTTTCAGCAACTGAATTTTGGAACTTTTTGGGTAAAGTAGTTGGTGGATACCAACCG
CCCCGGCCCCTTAACTTGGCCCATTCATTAACCAAAGCAAACTCAACCCAAACCCTACAA
AAAATTGTGGAGGATCCACTTTCAATAAAACGGGTTGACCCGGTTGAAGATCATTGGATT
GCTAATGCAAGTTGCAAGTTGGAGTCATTTTCAATCCATGTTAGTGCATCCAAATTGGGC
CACATACAATCAAGAATAGGCATTCAAGGCCCATTTGAATCACTATGTGCTATTATTTGG
CAGTCCATTTCAAGAATTAGAGATGGGCCTGGCCCAAAAGTTGTGACCATTTGTAAAAAA
AGTGAAGAAAAGAAAGAGGGCCTTATAGGAAACACTCAAGTAATTGGTGTGGTTAAGGTT
GATGACTCAATTAGAGAAGCTAATCCTAGTGAATTAGCAAGGTTGATTAAAAATGAGATC
ATCGACGAGCGATTAAAGATTGATGAAGCCATCGAGAAAGAGCATGGAGTGTCGGATTTC
ATTGTTTACGGAGCAAATTTAACTTTCGTGAGCTTGGAGGGTGCTGATCTCTATGGATTC
GATTGGAAGGGACATAAGCCAAAAAATGTAAATTACTTTATCGATGGAGTAGGCGATGCA
GGGACCGTGTTGGTACTTTCGGACGGGCCAAATGATTCTGAAGGAAGGATTGTGACCATG
ACTTTGCCTGAGGATGAGATAATGAAGTTGAAAAATGAGCTAAACAACGAATGGTCTATT
GCTTGAACAACAACAACATGTCCAGTGTAATCACATAGGTGGAGTCTCGAAATGGCCTAT
TGCTTGAAATAAAAAGTATTTGTTTCAAAGTTTAATTTGGTGTATTTGTGGTGTTGGTTT
GTTACATTACTAAAGTTGGGCTTTAGAACTTACTTTTATTTGAGCTATTGAAATAATAAC
TTTGTCTTTGCTCTTTCTTT
