Microarray Probes on PGSC0003DMT400062403
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50525_PI426222305 |
JHI_St_60k_v1 |
GTGGGGTTTTTAATCAGAAGGCTAATCGCAAGGTTGTTAATTAGGAAACATATGTTATAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062403
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062403 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G26010.1 |
+2 |
4e-86 |
265 |
135/245 (55%) |
Peroxidase superfamily protein | chr4:13200653-13201688 FORWARD LENGTH=310 |
Transcript Sequence (1013 bp)
>PGSC0003DMT400062403 1013 pgsc_dm_v3.4
GAAAAATAGATATACGATTTGTGCACATCCTAACTGTGAGATTATCTTGATATATTATTG
TTTGCGTGATTTTGTTCCTAAATGTATAACTTGATTTTAGGGCTGTGACGCATCGATACT
CATAAAGTCAATAGGTTCTAAGAAATCGGAGAGAGAAGCTGGCCCAAACAAAACGGTACG
AGGATTCGAGTTGATCGATAAAATCAAGAAAACCCTAGAAACTACCTGTCCATCAACAGT
TTCATGTGCTGACATAATAACACTAGCAACTAGAGACTCTGTAGCATTAGCTGGAGGCCC
AAATTATCCAATTCCAACAGGTAGACGTGATGGGCTAATTTCAAATGCAGCAGATGTAAA
TTTACCAGGCCCATCATTAACAATTCCACAAGCCCTCCAATTTTTCACAAATAAAGGACT
TACTTTAAATGATATGGTCACACTATTAGGGGCTCATACAGTTGGAATCGCACATTGTAA
TTTTTTCCAAGATAGGCTATCACCCGTACCTGATAAAACTATGGATCCTACGTTAGCGGC
TCAACTATTGAAAACTTGTGCTAAAAGTTCTGCAACGGCGTTTCTGGATCAAAATACGTC
TTTTACTGTTGATAATGAGTATTATAGACAAATTACGTTACGTAAAGGTATATTGACGAT
TGATCAAGAGCTTACGTTGGATAAGTCAAGTGCTCCAATTGTTACAAGTTTTGCAGCTAA
TAAGGATGTATTTAGCCAAAGTTTTGCAAATGCAATGATAAAAATGGCAAATATTGATGT
TTTAGTGGGGAGTGCTGGAGAAATTAGGAAAAATTGTGGGGTTTTTAATCAGAAGGCTAA
TCGCAAGGTTGTTAATTAGGAAACATATGTTATACTATAGTATTTAATTTTGAGTGTATT
ATTTTTATTTTACTAAAAAAAATATAAGGTGTATGTTTTTGCATTATTTTATATATGAGA
ATTGTAAAATAACTTGGTAAGTTATCGTTTTTTGTATTGTTACAATACCTCCC
