Microarray Probes on PGSC0003DMT400062402
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50539_PI426222305 |
JHI_St_60k_v1 |
GTGGGGTTTTTAATCAGAAGGCTAATCGCAAGGTTGTTAATTAGGAAACATATGTTATAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062402
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062402 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G26010.1 |
+2 |
3e-111 |
332 |
171/313 (55%) |
Peroxidase superfamily protein | chr4:13200653-13201688 FORWARD LENGTH=310 |
Transcript Sequence (1190 bp)
>PGSC0003DMT400062402 1190 pgsc_dm_v3.4
GAAGTACTATTTTCTACTTTGATAGTGTTAGCATATATAGTTTGGGTGTGTTGATTTCAT
TAACATCATGAAGATGAAAATGATATTATCATTATTAATATTTCATTGTTGTTTAATCCA
TTTAGTTTCAGCCCAACTTCTTCAAGTTGGTTTTTACAATACAACATGTCCACAAACTGA
AACTATTGTTCGACAAGCTGTGCAGAATCAGTTCAATAGTGACCCTTCCATCACTGCAGC
TTTGCTTCGCATGCATTTTCATGATTGCTTTGTTAGAGGCTGTGACGCATCGATACTCAT
AAAGTCAATAGGTTCTAAGAAATCGGAGAGAGAAGCTGGCCCAAACAAAACGGTACGAGG
ATTCGAGTTGATCGATAAAATCAAGAAAACCCTAGAAACTACCTGTCCATCAACAGTTTC
ATGTGCTGACATAATAACACTAGCAACTAGAGACTCTGTAGCATTAGCTGGAGGCCCAAA
TTATCCAATTCCAACAGGTAGACGTGATGGGCTAATTTCAAATGCAGCAGATGTAAATTT
ACCAGGCCCATCATTAACAATTCCACAAGCCCTCCAATTTTTCACAAATAAAGGACTTAC
TTTAAATGATATGGTCACACTATTAGGGGCTCATACAGTTGGAATCGCACATTGTAATTT
TTTCCAAGATAGGCTATCACCCGTACCTGATAAAACTATGGATCCTACGTTAGCGGCTCA
ACTATTGAAAACTTGTGCTAAAAGTTCTGCAACGGCGTTTCTGGATCAAAATACGTCTTT
TACTGTTGATAATGAGTATTATAGACAAATTACGTTACGTAAAGGTATATTGACGATTGA
TCAAGAGCTTACGTTGGATAAGTCAAGTGCTCCAATTGTTACAAGTTTTGCAGCTAATAA
GGATGTATTTAGCCAAAGTTTTGCAAATGCAATGATAAAAATGGCAAATATTGATGTTTT
AGTGGGGAGTGCTGGAGAAATTAGGAAAAATTGTGGGGTTTTTAATCAGAAGGCTAATCG
CAAGGTTGTTAATTAGGAAACATATGTTATACTATAGTATTTAATTTTGAGTGTATTATT
TTTATTTTACTAAAAAAAATATAAGGTGTATGTTTTTGCATTATTTTATATATGAGAATT
GTAAAATAACTTGGTAAGTTATCGTTTTTTGTATTGTTACAATACCTCCC
