Microarray Probes on PGSC0003DMT400061156
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19932_PI426222305 |
JHI_St_60k_v1 |
GGGGATTTTGATTCTCCCTATTATAATTTCCTTCCCCGCCCGCATCTATGTAATAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400061156
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400061156 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41475.1 |
+1 |
5e-53 |
174 |
90/162 (56%) |
Embryo-specific protein 3, (ATS3) | chr2:17295259-17296329 REVERSE LENGTH=179 |
Transcript Sequence (915 bp)
>PGSC0003DMT400061156 915 pgsc_dm_v3.4
ATTTTTAGTAGCCACGTTATGTAGAAATCTCTTTCATTGATAACGGAAAATGGGGTTGTT
GATAGGTGAGGGGCGTGAGACTATTAAAATTCAACATATACAGCAATAATCAAACAATTA
AATTTAACATTGAAAATGGGTGGTCAGTTGGTTGTGCTCAGCTTAGCTGTATTCTTCATC
AGTTTCTCACAAGCAACATCAATAAAACCCTTAATTTTCATCGAAACCAATCATAGCGCC
ACTGCTGCTAGGAGTTGCTCATACACATTGACCATCAAAACAAGCTGTTCTTCACCTAAA
TACACCAGAGACAGAGTCAGTATTGCTTTTGGAGATGCTTATGGATTTGAGGTCTATGCG
CCCAGGATAGATAATCCATCATCGAGGATATTCGAAAGCTGTTCTACGGATACTTTCCAG
ATCCGTGGCCCCTGTATTTATGAGATCTGCTACCTTTACTTGAAGAGAGTTGGATCTGAT
GGCTGGAAACCGGAGAGCGTCAAGGTGTACGGTTCAGATCGTCCTGCTATTACCTTTAAA
TATAATAAGCTTCTTCCTAATGGAGTTTGGTATGGATTTAATCACTGCCGTAAGATCATG
TAGCTGATCTGCCGTAGAATTCCACTATCCATGAAATTGATGTATTTAAAAGAAGATTTA
ATCTCTGTTTTGTTTCCTTCCAGAGATTAATTTATCGCCAAATAAAGGTATTTTTTTATT
TCTTGCTGTTACAATTTTAGCCTTTAGCTTTTCTTTGCAGATGAACTTCATCAGATGCGT
TGTATCCATAAATGGGGATTTTGATTCTCCCTATTATAATTTCCTTCCCCGCCCGCATCT
ATGTAATAAAAAAAGAAAATATGTGTGTTTATGTTTAGTAGGAATAACCAAATTTGATAA
CAATTTCCAGCTGAC
