Microarray Probes on PGSC0003DMT400060234
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14364_PI426222305 |
JHI_St_60k_v1 |
CACATGTCTCTCTAGGGTTTATTTTGTTTCTGTTGGTTCTTTCATTTGGTATTATTAGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060234
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060234 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G12560.1 |
+2 |
3e-131 |
409 |
294/689 (43%) |
TRF-like 9 | chr3:3982272-3984848 REVERSE LENGTH=619 |
Transcript Sequence (2552 bp)
>PGSC0003DMT400060234 2552 pgsc_dm_v3.4
TTTTTTGGTGTAGATCGGTGAAATTAGTGACATTGGTTTATTGCATTGGGTGATCACTTG
TTGGCATGCTTCTGAAGATATGGTGTATAAGAAGAAGTTAGATTTTGGTTTCAATGGCTT
TCAAGTTCCAGTTATACCTAAAGCTCCTAGATCAGTTAGAAGGAGACGTTCCTGTAAAAA
ATTGGATGATGATCAAATTTGTGCATTTGAATTATTGGCGGCTGTTGCCGGGAAGCTTTT
ACTGGAGAGCGAAAGCTCTACTTCCAGTAATGCAGCAGAAGGGAAAAATGAAATTGCTGA
TGGCAGGGATGGTATTAAAAGTGAACAAGTGGAAGAAGGTAAAGCTGTGAAATCAGAGTA
CCTCGACCAGGGGAGTTGTGTAGAAAGCGATTATATACCCGAAACTGCAGCCCAAGATCA
GAATTTGAAACATGGTTTCGATAAGCCTCATCATGCAGAAAATAATTATTTCTTGGAGCA
TACTTCTATTGTTATAGGCTCTGACGCTGACTTGAAGTTGGAAAACTGCAAGGAGGTCAA
TATACCTGATGGAAAATTCCACCCCAAAATTGAAGGTGGATCCTCTAGTCTTGAAGATCC
ATGTGATGGTAAAATCAGGACAGGAATTCAAAAGCACTTAGATGATGACAGCAAGCAGAT
AGAGGACGTAACTGTGACTAACACTTGTAGTGTAAAGAATCCAATCGAAGAATGTGTTAA
TAACAGTGGTTTGTTTAACTCAGACGGTAGTGTACAGTTACCCTTGTACAGGGATTCGGT
TCCTAGTGCTTCTTTTGTAAAGCACAGGAACAGTGTAAAGTTAGGTATTAGAGATGATGA
CGAAAATTCTTTTGACTGCTATAGATATAGCACCAAGTTAAGGGCCTTTAGGACGACATC
ACGACTTGGATACAGAAGAATAAGGAAGATGCTGAAATCTCGACACTGGAAAGCAGCTCC
TAAGTTGAAGGAATATGAGCGATCTTACACAAATGGTGGAGTGGAGTCCTTTTACCTCAG
TAGGAAAAGTGTACGTGCACGCAAGAGATGCCAACTTGAAGTTCCTTCCAAGAGACGGAA
ATTGAGCAACCATGGCTTTGCTGTTGCATATTACCAGGAGGCCAGTAGTGAAAGCGTGAC
AAATTCACCTGACAAGGAAATCAAACGAGACATTAATACCTCCCATGCCATCCCACCGAG
AGGAACTACTGATCCAGCTCCAGTTAACAATCATCACAAAAAGGACCCTAATGTAAAATT
TAGCATCAAGTCCTTCAAGGTGCCAGAGCTTTACATAGAGGTTCCTGAAACTGCAACAGT
TGGCTCGCTGAAGAGAACGGTTATGGAGGCAGTTACCGCTATACTGGAAAGTGGATTACG
GGTTGGGGTGGTTCTCCAGGGAAAGAAGGTCAGAGATGACAATAGAACACTGGAGCAGGC
TGGCATTTCCCAGAACGGCAACCTCGATAATTTGGGTTTCACTTTGGAGCCTAGATTCAC
CCAAGTTTCTCCATCATCATCTCCTAATAAACTTCTGGCTTCATCAACATATGCTGCAGA
TCAGGAACTAACAAGGCGGCGACCTAGTCCTATATTGGAATTGGGGATTCACAACGCTTC
AGCAGACCCTCTAGAGACTGAGATGTGCAAGTACAACGAGAATAACCATCCATCAGAGCT
ATCTCCTACAAATCCTATTGATTCATCAACTGATGTATCTATTCCAGATTCTAGAGCCTT
GGTGATAGTTCCTTCAGTTAATGCAGAGGCACTTGCTATGGTTCCGCTGAACCAAAAAAG
TAAACGTTCTGAACTTTCACAACGTAGAATACGGAGACCATTCTCAGTTGCAGAAGTAGA
GGCACTAGTTGAAGCTGTGGAGCATCTTGGAACTGGAAGGTGGCGTGATGTTAAAATGCG
TGCTTTTGATAATGCTGATCACCGAACCTACGTCGACTTGAAGGATAAATGGAAGACATT
AGTACATACAGCAAGCATTGCCCCGCAACAACGAAGAGGCGAGCCTGTTCCCCAGGAACT
TCTGGACAGAGTCTTAGCTGCCCATGCCTACTGGTCTCAACAACAGGGGAAACATCATGC
TGAACCTCTGAAAACTCCAGATGCAAAAGCACTGAAAGTTGGCGCTTGAAGGAATTCGTC
GAATTGTCAATGATGTAAAGAAACTATTATATTAGGTAACACGAAGAGCACGACGAGGAA
ACTGTAAAAAAAGATTCGTTCTGTTTCTCGTCAACTCGGTTAGACTCACTGATTTGTTGC
CTTACAACAGTTGTGACTTTGTAAATTGCTCAGGAATAAAGCTGTGTAAGCAGCACATGT
CTCTCTAGGGTTTATTTTGTTTCTGTTGGTTCTTTCATTTGGTATTATTAGGGTTATGGA
AAGAATCAAATGTATTAAATATGTACATTAGTAGTAGTTCCAATTGATTTTCTAGTGTAA
TTTCACCATTGTAAGCAACTATCCTGATATTTAGTTGAATCTCATTTCAAGTGTTTTGTT
ATTAAGTATGTATCTATGTAAGATAATATTGC
