Microarray Probes on PGSC0003DMT400058590
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36055_PI426222305 |
JHI_St_60k_v1 |
TCCTTCTGTCTCGTATGGTAAGCATCCTCTGTTGGGTTTTGAGCATTTTTTCCCTTCCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058590
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058590 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G12710.1 |
+1 |
2e-121 |
361 |
171/265 (65%) |
phloem protein 2-A12 | chr1:4326980-4328324 REVERSE LENGTH=291 |
Transcript Sequence (1504 bp)
>PGSC0003DMT400058590 1504 pgsc_dm_v3.4
TAAATACCCATATCACAAATTTTAATTTTCATCTTTCAGTATTTGAGATTTTTTTCTAAT
TTTTACTGAAAACCCATCATGGGTTCTTCGTTTTCTGTGTTGATTCCTCAGTTTTCGTCT
ACTGTTACTAAGCAAAATCATTCAAGTCTTGGTGATTTGCCGGAAAGTTGTGTAGCTTCA
GTTCTTGTATACATGGACCCGCCTCAGATCTGTAAATTGTCTATGCTTAATAGGGCTTTT
AGAGGCGCTTCTTCTGCTGATTTTGTGTGGGAATCCAAGTTGCCGATGAATTACAGCTCT
ATTATTCAAAGGGTCTTTGCTGGTCGAAATTTTCCGGCTAATTTGTGTAAAAGAGATATT
TATGCTATGCTTTGTCGACCTAATTCTTTTGATGGTGGCTCAAAGAAAGTTTGGTTAGAT
AAGAGAACTGGAAGAGTTTGTATGTCTATATCTTCAAGTGGCTTGGCAATAACGGGCATC
GATGATAGGAGATATTGGAGTCGGATTGAAACTGATGAATCTAGATTCAAGTCCGTTGCA
TATCTCCAACAGATCTGGTGGTTTGAAGTTGATGGAGAGGTCGATTTCCCATTCCCCGTT
GGGTCCTATAGCATATTCTTCAGACTACAAGTAGGACGTGCCTCTCGGAGATTTGGACGC
CGAGTCTGCAACTCCGAGCATGTTCACGGGTGGGATAAGAAACCAGTGCGGTTTCAGCTC
TCGACATCAGACGGTCAACAAGCTACAACCCAATGTTACTTGAACGAACCTGGAATATGG
AAGTACCACCATGTAGGTGACTTTGTTGCCACGGGTTCAGTAGAACCCATGAAAGTTAAA
TATTCGTTGACACAGATCGATTGTACACATACTAAAGGTGGACTATGTGTAGATTCTGTA
CTGATATGTCCAGTAGAGTTTACAGAGAGGTTGAAGCAGAGTTTTTGATTTGCTGATTAC
CTGTTTCTGAGGGCTCGTTTGGTAGGAGGGGTCAGGGATAACTAATCCCGAGATTAATTT
TAGGATGAGTTTATTCCATATTTGGTTAGGATAAAATTGCGGGATAATAATCGTGGAATA
ACTTGTTCCTAACCAAACGAGCCCCAAGAGTAGTTGTAGTTCTAGTGCTATCCATAGTTT
TTCCGAGTGGTTAGTATTAAGAGATAATCATATATTAGACTGAGGCAATTTGTGTAAATG
TATACTATGGGGCTGTTTATCCATTCATTGTGCTGAGTTATTAGCATCTATTACATTAAA
AATACATTTCTTTTTGCACTTTCAATTATATTATGTGTTACTTGAGCCGAGGTTTTTGTT
AGAAACAATCTTTTTTCATGAGGAGGTAGTTGGTAAGGTTTGTGTACATTCTCGACACTC
CACACACACATAGTTTCTACAGAGAGCTTCTACTAGCTTTAATGACCTTGATTAGAATAT
CATTTCCTTCTGTCTCGTATGGTAAGCATCCTCTGTTGGGTTTTGAGCATTTTTTCCCTT
CCTA
