Microarray Probes on PGSC0003DMT400058561
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36091_PI426222305 |
JHI_St_60k_v1 |
CCAGGAGCCTACTACTTCAGAGGGGTTGATTCCGAGTACAGAAGAGCTTATGGTAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058561
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058561 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G11820.2 |
+1 |
0.0 |
533 |
290/451 (64%) |
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461 |
Transcript Sequence (1308 bp)
>PGSC0003DMT400058561 1308 pgsc_dm_v3.4
ATGGCTTCTCAACCGAACAATGTTGGAATACTCGCAATGGAGATTCACTTTCCTCCTACT
CGCCTTGTGCTGGAAGAATTGGAGGCTCATGATGAAGTAAGCAAAGGCGCGTATACAACT
GATCCTGGACAAGATTGCATGGGCTTTGTTATTGAGGATGAAGATGTTGTATCAATGAGC
ATGACGGCTGTTACTTTATCTTTTGGAGAAGAACATGGAAATACCGACATTGAAGGAGTT
GACTCCCATAATTCTAGCTATGGGGGAACTGCTGCATTGTTCAACTGCGTTAATTGGGTG
GAGAGCTCTTCATGGGATGGACGTTATGGGCTTGTTGTATGCACGGATAGTGCGGTCTAT
GCAAAGGGACCTGCTCGGGCTACTGGAGGAGCTGCAGCAATTGCTATGCTTGTAGGACCT
GATGCTCCTATAGTACTTGAAAGCAAGATCAGAGCTAGCCATATGTCGCACGTCTATGAT
ATTTACAAGCCCATCCTTGACAGTGAAGATCCAGTGGTGGACAGTGAGATTTCGCAAACC
TGTTATCTTAAGGCACTTGATTCTTGCTACAAGGGTTTATGCAACAAATATGAGAAAGTG
GAAGGCGAGCAATTTTCAATTGATAATGCAGCCTACTTTGCATTCCATTCACCATACAAC
AAGCTTGTCCAGAAGAGTTTTGGTCGCTTGCTTTACAACGACTTTTTAAGGAATGCTAGC
TCTATTGACGAGTCTGCTAGACAAATCCTGGCTCCCTTTGAATCCTTAACTGGTGATGAA
AGCTACCAAAGTCGTGATCTTGATGAGGCATCCCAACAAGTTGCTAAACCATTTTATGAT
GAGAAGGTGGAACCTACAACATTGATACCAAAACAAGTTGGCAACATGTACACCGCGTCT
CTCTATGCTGCATTTGCATCCCTCCTTCACAATAAGCACGACACATTGGCCGGTCAGCGT
GTAATCATGTTCTCCTATGGGGGTGGATCAACTGCAACAATGTTTTCACTAAAACTTAAT
GAAGGTCAACATCCTTTTAGTTTGTCAAACATTGCAACTGTGATGAATGTTGCAGAGAGG
CTGCAAAAGAGATACGAGTACACTCCTCCCGAATTTGACATTTTCGTTGGACTTTATGAG
GCCAGAAGAGAGTTTGGCATCAAAAACGACTATTGGTGTGAAATGCCTGGCAGCATTCTT
CCACCAGGAGCCTACTACTTCAGAGGGGTTGATTCCGAGTACAGAAGAGCTTATGGTAAA
AAAACTCCCGAGATTGAACAGGAGATAGAAGAAATAATCCTAGAATAA
