Microarray Probes on PGSC0003DMT400058486
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42887_PI426222305 |
JHI_St_60k_v1 |
GGTGTTCATCTTGTTAAGAATATGCCTAATGAAGCACTTAATTGTGGTTTGACTAGGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058486
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058486 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G21105.1 |
+1 |
1e-173 |
504 |
240/383 (63%) |
Plant L-ascorbate oxidase | chr5:7172727-7177409 FORWARD LENGTH=588 |
Transcript Sequence (1413 bp)
>PGSC0003DMT400058486 1413 pgsc_dm_v3.4
ATGCATTGGTGTCCAGATGGTGTGGATGGTGTTGTGATATCTATCAATGGACAATTTCCT
GGTCCAACAATTAGAGCAATTGTTGGTGACACCATTTTTGTTCACCTTACCAATAATCTT
CCTACTGAAGGACTAGTCATTCATTGGCATGGAATCTCACAGATTGGAACACCATGGGCT
GATGGAGCTGCATTGATCTCCCAATGTCCCATTAATCCTGGAGAAACATTCCTATACAAG
TTTAAAGTTGACAAGACTTTATTGATGAATGGAAGAGGTCAATTCAATTGTTCTCTTGCG
GCGCAATTTAGCAAATTACCCATTACTCAGTGCAAGTTAAGAGGGGATGAGCAGTACGCA
CCCCAAATTTTCAAAGTTCATCCAAGCAAGACTTATAGGCTTAGAGTGGCTAGCACAACT
GCATTGGCATCACTCAACTTGGCCATTGAGGGTCACAAAATGATGGTGGTTGAAGCAGAT
GGAAACTATATTCAACCATTTTTTGTGGAAAATATGGATATTTATTCAGGTGAAAGCTAT
TCAATTCTCTTCAAAACTGATCAAGATCCATCAAACAACTATTGGATTTCAATTAGTGTA
AGAGGAAGAGAACCAAAAACACCACAAGGCCTTACCATATTGAACTACATTCCTAATTTT
GCTTCAAAAATTCCAAATTCACCACCACCTTTGGCACCTCTTTGGAATGATTATAACTAT
AGCAAAGCCTTCTCTAACAAAATTTTTGGCTTGATGGGGTTGTCTCCTAAGCCTCCTACT
CGACAAAATCGTCGTATTTTGCTTCTCAATACGCAAAACAGGATTGAAGGTTACATAAGA
TGGTCAATCAACAACATTTCCTTAGTCTTTCCAACTACACCCTATTTAGGCTCAATCAAA
CATGGCATAAACAATGCATTTGACACTAAATCTCCACCAAACACCTTCTCAAAAAACTAC
AACATCATGAAACCACCACCAAACCCTAATTCAACATATGGAAACAGGATTTACATGTTG
AAATTCAACACTACTATTGACATAATCCTTCAAAATGCAAATGCCTTAGGTGAAAATGTA
AGTGAAATTCACCCTTGGCATTTACATGGACATAATTTTTGGGTATTAGGATATGGAGAT
GGAAAGTTTGATCATAAAAAAGATGTTGAGAAATTCAATTTGAAGAATCCACCATTGAGG
AATACTGTTGTGATATTTCCATATGGATGGACAGCTATAAGATTTGTGGCAAATAATCCT
GGGGTATGGGCTTTTCATTGTCATATTGAACCTCATTTGCATTTAGGCATGGGAGTTGTC
TTTGCTGAAGGTGTTCATCTTGTTAAGAATATGCCTAATGAAGCACTTAATTGTGGTTTG
ACTAGGAAAATGTTTGTGAAAGACAAACATTAA
