Microarray Probes on PGSC0003DMT400058195
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33516_PI426222305 |
JHI_St_60k_v1 |
GGGGTGTCAGTTGAAGTATTTGTTTGATTGTGGTAAAATGGAATGTTAATATATCCCACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058195
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058195 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G69910.1 |
+3 |
0.0 |
663 |
360/575 (63%) |
Protein kinase superfamily protein | chr1:26330166-26332076 FORWARD LENGTH=636 |
Transcript Sequence (3011 bp)
>PGSC0003DMT400058195 3011 pgsc_dm_v3.4
AAAGAATTCATCATTTTTTGTTTTGTTTTGTCTTCTTCTCTATTGTGTTCACGTGACCTT
CCTCTTTTCTTTCTACCTCGAGACCCCCCACACTCCCAAACTCTCACTTCTCTACTACCC
AACATCCTAGGCAGTTGTGATAATAGTTTAAAGAATCTCAACCCAAATCAAGATTCAAAG
ATTTCTCTTTTTTTTCTCCATAAAGATTCAATCTTTTTCTTTCTTTGTTGGATTCTGCTT
TTGAATGGCTTCAGTAACTAGTAGGAGTTCATCATAATCATGTCATTTTGGTTTAACCCC
AAATCAAGATTTCCCTTTTTCTTCCCAAAGATTCAATCTTTCTTCCTTTTTATTGGATTT
TGCTGTTGAATGACTTCAGTAACTAGTAGGAGTTCAGCATAATCATGTCATTTTAAGCAT
TTTTGCTTTAACCCCAAATCAAGATTTCCCTTTTTAACTCCCAAAGATTCAATCTTTCTT
CTCTTTGTTGGATTGTGCTTTTGAATGACTTCAGTAACTAGTAGTAGTTCAGCATAATCA
TGTCAATTTTAGCATTTTTGCTTTAACCCCAAATCAAGATTTCCCTTTTTAACTCCCAAA
GATTCAATCTTTCTTCTCTTTGTTGGATTGTGCTTTTGAATGACTTCAGTAACTAGTAGT
AGTTCAGCATAATCATGTCAATTTTAGCATTTTTGCTTTAACCCCAAATCAAGATTTCCC
TTTAACTCCCCAAAGATTCAATCTTTCTTCTTTTATGTTGGATTTTGCTGTTGAATGACT
TCAGTAACTAGTTGGAGTTCAGCATAATCATGTCATTGTTACCATTTTTTTCAATCTTTC
TGTTCTTGGTTTTCATTCTTGAAGCAGCAGCAGCAGTTCATAGCTGTTTAAAATCTGAAA
TCTCATGTCCACCTTTTGCTTCTTTTCCCCCTTTTCCTTTTTCTTCATCTCCTGGTTGTG
GTCATCCTTCTTTTCAAATCCAATGTTCACCTTCACATGCTGTTATTTCAATCAATAACT
TGTCTTTCTCTTTGCTTCATTATGAGTCTACTTCTTCAACTCTTCTTCTTTCTCCAGCTT
CACTTTCACAAAATGAAATCAGCTCAGTATCTACTGATTTCAAGAACTGTTCTTTGCACC
ATAGATCCATTTCCCTTTCTGGTTCACCATTTAAGGTCTCTGACTCATCTTGTTCTAGGC
TTTCTGCTCTTAGGCCTTGTCCACCCACAAATCTCCCTAATTGTAGTCACTGTCCATGGC
AATGTAAACTTATCAAGAACCCACTTCAGCTTCTGCATGAATGTGGATTGAGACACCATT
TTGAGTCTGATGAAAGATGCCAAAGTGACATTCTTGGGTTTCTTGATGAATTCTTGAAAA
TGGGGATTGAGGTTGAGTGGGATGAAGAACAAGATTCATATTTTTCAAACTGTAGGACTT
GCAGAGCTAGCAGTGGTGTTTGTGGATTCAATTCTTCACACCCAAAGAAACCATTTTTAT
GTTTTCCATCATCACAAGTTAGGTACTCACCTCCTTTGATTGGACAAAAAAGCGCGAATC
GTGTAGTTATGTTGTCAATGGTCTTTCTATTTGTGTGTTTTCTGGTTGTTTTCTCTATTG
GATCTTTAATTTTTCGTTCAAGAGGTAAAGGGGCTGGTTCAGAAGAAGATCCCACTATCA
TTTACCTTCGTAGGCATCGATTAGCTAGTTTACTTCCACCAGTTTTCCCTTATGAGGAAC
TTGAAAGCTCCACAAATCACTTTGATCACAAGAGGAAACTTGGGGATGGAGGATTTGGTT
CTGTGTACTTGGGGAATCTTGATGATGGTAGGCTTGTTGCAGTAAAGCATTTGCATAAGC
ATTCTCCCACTGGTACCAAAGCTTTTTCAACAAAGTCATTTTGCAATGAAATCTTGATTT
TGTCATCAATCAATCACCCAAATCTAGTCAAACTTCATGGCTATTGTAGTGATCCAAGAG
GGCTTCTTTTGGTTTATGACTATGTTCCAAATGGTACTCTTGCTGACCATCTTCATGGTA
ACAAGAATTTGTACAAAAAAGGTTCTTTAACATGGACTTTAAGAGTTGATATAGCACTAC
AAATTGCAATGGCAATTGAGTACTTGCATTTCTCTGTTGTTCCACCTATAGTTCATAGAG
ATATTACATCAACCAACATTTTTGTAGAAAAAGATATGAGGGTAAAAGTTGGTGACTTTG
GGCTTTCAAGACTCTTGGTATGCACAGATACATCAGTGGCATCTGGTGATTCAACTGGTG
AAGTTTGGACAGGTCCACAAGGAACTCCTGGTTATTTAGATCCTGATTATCACAAGTCGT
TTAGATTGAACGAAAAAAGTGATATATATAGCTTTGGTGTTGTGTTGTTGGAACTAATAA
CAGGGATGAAAGCTGTAGACCAAAAGAGGGAGAAGAGGGAAATGGCATTGGCTGATATGG
TAGTTTCAAGAATTCAAATGGGGTTGTTGCAGCAAGTTGTGGACCCTTTTTTGGTGGTGG
ATGGTGAAGCAATGGAAGGCGTCGGCGCAGTGGCTGAGCTCGCGTTCCGTTGTGTAGCGG
CCGATAAGGATGATCGGCCTGATTCAAGAGATGTGGTGGCAGAATTGAGAAGGATAAGGG
GCAGGACAAGAGGAGTTGGAAGTGGTGGTATTTTGAGGACTTCAAATTCTAGTAACATGG
TGGTTCCTGATGGGATTGGTCTAATTGACTAATTAATCGATTATTTGGTAGACAGAGTTA
ATCGATATCTATACTGATTAGAAATAGTCAGGTATTAGATAGAACGATCACATTGTGTGT
ATGATAATTGTGTTGATGAGAGGTAGCCGATATAATATGGTTCTGAGGTACCAACATCTC
ATTGAATAATCATCTGTTAAAGTGTAAATGTGTATTGTACATGTGTGTGGGATGGGTGGG
GTGTCAGTTGAAGTATTTGTTTGATTGTGGTAAAATGGAATGTTAATATATCCCACTTTT
TTTACCGCTTG
