Microarray Probes on PGSC0003DMT400057725
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15920_PI426222305 |
JHI_St_60k_v1 |
GGAATTAAAGGGGTGTATTAGAATGAATATTAAGTTGAAGAATCTGAGGAACTGTGTCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057725
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057725 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G18150.1 |
+3 |
8e-19 |
89 |
85/342 (25%) |
RNI-like superfamily protein | chr3:6217929-6219500 FORWARD LENGTH=456 |
Transcript Sequence (1703 bp)
>PGSC0003DMT400057725 1703 pgsc_dm_v3.4
CTTTTTTTAAGAGTTGAGAAACTCCAAAAAGCAAAATTGGAAAACGAAAAATGGGAGTAG
CTTCAGACCGATTATCTTCCTTGCCGGATTCAGTTCTGCTTCACATACTCTCCTTTCTTC
CCTTCGACGACGTCGTTCGGACCACCCGTCTCTGCCACCAATGGAGAACTCTCTGGTCCT
TCTCTTCCACCCTCAATTTCATTCACCATTCCAAAGACCTCTTTTCTGTACGAAAGTTCG
TTTCATTTGTTGACAAATCCCTCATAAACTTGCACGGTAACTGCAACAGTCTATTAAAGC
TTCACGTTGAGTTCCCCTTTAAACGTTGCTTTACATCCGATGTTACTGTTTGGGTTCTTT
TTGCCATCACCCATCAAGTCAAAGAACTCAATTTGGTTCTCTCCAATGATGATGGTGATT
GTTATAATCTCCCTAAGAGATTATTGTTCAACTCATTTCTTGAAAAAGCGAACTGGGTTT
CTTGTAGATTTTACAAAGTTCAAGCTGTCAGATGGGATTCTTTAAGGGAATTGAGAATTG
GGTCGACGGAATTTGATGATGATATAGTCAGGAAAATTGTTGCTGGTAGTCCGTGTTTGG
ATTTGTTGGAGTTGGATAATTGTTGGGGTTTTAGGTGTTTGGATTTGTTTGGTGGAAAGG
TGAGTAAGTTGGTGGTGAATGGGTATAAGGAAGTGAAGAAGTTCTTGGATCTTGAACTGG
AAATTAAAGCACCTTGTGTTAAGGTATTGGAATTAAAGGGGTGTATTAGAATGAATATTA
AGTTGAAGAATCTGAGGAACTGTGTCTCTGTGAAATTTGATTTTCACTCAAAGAACCCTA
AGGATGAGGAGTGTGACAACTTTTATGAACAGCAAGGAGATATGTTGATGGCCATGTTTG
GGAGTTTCAGTCATGTCAAAGATGTTATGTTAGGGACATGGTGCATTGAGGTTATGGCAT
TTTGGGACTCGCCATGGGTGCTGTTTACCATGATCAGCTGTGAGTGTTTAACACTGCATA
CTCCCATACAGAAGCGATATCTTCCTGGCATTATACGCTTATTAAAAAATTTACTCAAGC
TTCAGACGCTAATCATACATATGGCCCTACCCTATTTTGAGTTTGAGGCTTGCCTTATTC
CAGTTGTAAATGATGTTTACTCTGTTGAAGGAAAGCTTCAACTGTCTCTGCTTCCTCGAG
GTTGTGGTCATCAACTTGAAAAGATCAGAGTTTGTGGCTTTGAAGGAACGCAATCTGGCC
TAGAAGTTTTATTTCTGCGCGATCTTCTTTTGATATCTGCTAACATTGAGATGATGGTTA
TTGAATGGAGATCTGGACTTCAGAACTTGATTCGTGATGCATCAGTTGAGTTTGTGGCTA
AAACTTTATCAAACGTTTGTAAACGCTCAAAGAAAGCTGTGGTTTTGTTCAAAATGTAAC
TCTTGATTTTCTGCTGCTTGTTTTACATTAAGCAAGCTCGAGAGAAAGATTTGACTATTT
TTATTTGTTTTGGAAATAGAACTCAGTATGTTGATGCAGCATGTCAGTAAGAACTGAATT
AGCTAATTGTACTCAAAAGGGTTTTTCATCATTTTAGCTAATTGTACTCAAAAAGTTTTT
TCATCCGTTTCCTTTTCATGTTGTACTCTATTGAATCATTTAGCCGATTAATCTAGATTT
GTGCTGAGTAGGGCTCATTCGAG
